| Full name: small nuclear ribonucleoprotein U4/U6.U5 subunit 27 | Alias Symbol: RY1|U4/U6.U5-27K | ||
| Type: protein-coding gene | Cytoband: 2p13.3 | ||
| Entrez ID: 11017 | HGNC ID: HGNC:30240 | Ensembl Gene: ENSG00000124380 | OMIM ID: |
Expression of SNRNP27:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNRNP27 | 11017 | 212440_at | -0.2016 | 0.6680 | |
| GSE20347 | SNRNP27 | 11017 | 212440_at | 0.0321 | 0.8861 | |
| GSE23400 | SNRNP27 | 11017 | 212440_at | 0.0711 | 0.1612 | |
| GSE26886 | SNRNP27 | 11017 | 212440_at | -0.4604 | 0.0153 | |
| GSE29001 | SNRNP27 | 11017 | 212440_at | 0.0837 | 0.6563 | |
| GSE38129 | SNRNP27 | 11017 | 212440_at | 0.0266 | 0.8638 | |
| GSE45670 | SNRNP27 | 11017 | 212440_at | -0.1630 | 0.2599 | |
| GSE53622 | SNRNP27 | 11017 | 14459 | 0.1277 | 0.0671 | |
| GSE53624 | SNRNP27 | 11017 | 14459 | 0.2141 | 0.0009 | |
| GSE63941 | SNRNP27 | 11017 | 212438_at | 0.4505 | 0.2618 | |
| GSE77861 | SNRNP27 | 11017 | 212438_at | -0.0850 | 0.6941 | |
| GSE97050 | SNRNP27 | 11017 | A_23_P39774 | -0.1062 | 0.6635 | |
| SRP007169 | SNRNP27 | 11017 | RNAseq | -0.1999 | 0.6247 | |
| SRP008496 | SNRNP27 | 11017 | RNAseq | -0.3390 | 0.1734 | |
| SRP064894 | SNRNP27 | 11017 | RNAseq | -0.0415 | 0.7716 | |
| SRP133303 | SNRNP27 | 11017 | RNAseq | 0.3711 | 0.0077 | |
| SRP159526 | SNRNP27 | 11017 | RNAseq | 0.4035 | 0.0154 | |
| SRP193095 | SNRNP27 | 11017 | RNAseq | 0.0948 | 0.4043 | |
| SRP219564 | SNRNP27 | 11017 | RNAseq | 0.0015 | 0.9948 | |
| TCGA | SNRNP27 | 11017 | RNAseq | 0.0291 | 0.5884 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNRNP27 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNRNP27:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNRNP27 | 11017 | 11 | 1 | 18 | |
| GSE20123 | SNRNP27 | 11017 | 11 | 1 | 18 | |
| GSE43470 | SNRNP27 | 11017 | 3 | 0 | 40 | |
| GSE46452 | SNRNP27 | 11017 | 2 | 3 | 54 | |
| GSE47630 | SNRNP27 | 11017 | 7 | 0 | 33 | |
| GSE54993 | SNRNP27 | 11017 | 0 | 6 | 64 | |
| GSE54994 | SNRNP27 | 11017 | 12 | 1 | 40 | |
| GSE60625 | SNRNP27 | 11017 | 0 | 3 | 8 | |
| GSE74703 | SNRNP27 | 11017 | 3 | 0 | 33 | |
| GSE74704 | SNRNP27 | 11017 | 9 | 1 | 10 | |
| TCGA | SNRNP27 | 11017 | 36 | 2 | 58 |
Total number of gains: 94; Total number of losses: 18; Total Number of normals: 376.
Somatic mutations of SNRNP27:
Generating mutation plots.
Highly correlated genes for SNRNP27:
Showing top 20/295 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNRNP27 | DCTN4 | 0.781584 | 4 | 0 | 4 |
| SNRNP27 | UFL1 | 0.780571 | 3 | 0 | 3 |
| SNRNP27 | SLU7 | 0.780551 | 3 | 0 | 3 |
| SNRNP27 | CD44 | 0.76977 | 3 | 0 | 3 |
| SNRNP27 | REEP5 | 0.730685 | 3 | 0 | 3 |
| SNRNP27 | ANKRD40 | 0.726199 | 3 | 0 | 3 |
| SNRNP27 | CUL3 | 0.719441 | 3 | 0 | 3 |
| SNRNP27 | MB21D2 | 0.712724 | 3 | 0 | 3 |
| SNRNP27 | FYTTD1 | 0.710923 | 4 | 0 | 3 |
| SNRNP27 | UBE2B | 0.705665 | 4 | 0 | 4 |
| SNRNP27 | TOX4 | 0.705279 | 4 | 0 | 3 |
| SNRNP27 | CYB5R1 | 0.696088 | 3 | 0 | 3 |
| SNRNP27 | ATP11B | 0.695811 | 3 | 0 | 3 |
| SNRNP27 | DNAJC8 | 0.692383 | 3 | 0 | 3 |
| SNRNP27 | UBR2 | 0.687361 | 3 | 0 | 3 |
| SNRNP27 | KCTD9 | 0.686019 | 3 | 0 | 3 |
| SNRNP27 | TBCA | 0.684856 | 5 | 0 | 5 |
| SNRNP27 | SCAMP1 | 0.684461 | 4 | 0 | 3 |
| SNRNP27 | FBXO8 | 0.683589 | 3 | 0 | 3 |
| SNRNP27 | EAF1 | 0.679535 | 4 | 0 | 3 |
For details and further investigation, click here
