| Full name: spermatogenesis associated 20 | Alias Symbol: FLJ21347|SSP411|Tisp78 | ||
| Type: protein-coding gene | Cytoband: 17q21.33 | ||
| Entrez ID: 64847 | HGNC ID: HGNC:26125 | Ensembl Gene: ENSG00000006282 | OMIM ID: 613939 |
| Drug and gene relationship at DGIdb | |||
Expression of SPATA20:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SPATA20 | 64847 | 218164_at | -0.0738 | 0.9170 | |
| GSE20347 | SPATA20 | 64847 | 218164_at | 0.3066 | 0.1077 | |
| GSE23400 | SPATA20 | 64847 | 218164_at | 0.4658 | 0.0000 | |
| GSE26886 | SPATA20 | 64847 | 218164_at | 0.8046 | 0.0130 | |
| GSE29001 | SPATA20 | 64847 | 218164_at | 0.2962 | 0.3248 | |
| GSE38129 | SPATA20 | 64847 | 218164_at | 0.2346 | 0.1465 | |
| GSE45670 | SPATA20 | 64847 | 218164_at | 0.1352 | 0.4771 | |
| GSE53622 | SPATA20 | 64847 | 146850 | 0.5297 | 0.0000 | |
| GSE53624 | SPATA20 | 64847 | 7737 | 0.5770 | 0.0000 | |
| GSE63941 | SPATA20 | 64847 | 218164_at | 0.1460 | 0.8159 | |
| GSE77861 | SPATA20 | 64847 | 218164_at | 0.6457 | 0.0263 | |
| GSE97050 | SPATA20 | 64847 | A_23_P118633 | 0.1964 | 0.3240 | |
| SRP007169 | SPATA20 | 64847 | RNAseq | 0.0986 | 0.8770 | |
| SRP008496 | SPATA20 | 64847 | RNAseq | 0.6238 | 0.1408 | |
| SRP064894 | SPATA20 | 64847 | RNAseq | 0.9075 | 0.0000 | |
| SRP133303 | SPATA20 | 64847 | RNAseq | 0.3625 | 0.0194 | |
| SRP159526 | SPATA20 | 64847 | RNAseq | 0.7660 | 0.0015 | |
| SRP193095 | SPATA20 | 64847 | RNAseq | 0.4645 | 0.0326 | |
| SRP219564 | SPATA20 | 64847 | RNAseq | 0.4485 | 0.3157 | |
| TCGA | SPATA20 | 64847 | RNAseq | -0.2226 | 0.0005 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SPATA20 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SPATA20:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SPATA20 | 64847 | 5 | 2 | 23 | |
| GSE20123 | SPATA20 | 64847 | 5 | 2 | 23 | |
| GSE43470 | SPATA20 | 64847 | 3 | 2 | 38 | |
| GSE46452 | SPATA20 | 64847 | 32 | 0 | 27 | |
| GSE47630 | SPATA20 | 64847 | 9 | 0 | 31 | |
| GSE54993 | SPATA20 | 64847 | 2 | 4 | 64 | |
| GSE54994 | SPATA20 | 64847 | 9 | 6 | 38 | |
| GSE60625 | SPATA20 | 64847 | 4 | 0 | 7 | |
| GSE74703 | SPATA20 | 64847 | 3 | 2 | 31 | |
| GSE74704 | SPATA20 | 64847 | 4 | 1 | 15 | |
| TCGA | SPATA20 | 64847 | 26 | 8 | 62 |
Total number of gains: 102; Total number of losses: 27; Total Number of normals: 359.
Somatic mutations of SPATA20:
Generating mutation plots.
Highly correlated genes for SPATA20:
Showing top 20/547 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SPATA20 | PHKA1 | 0.713534 | 3 | 0 | 3 |
| SPATA20 | PKIG | 0.661855 | 4 | 0 | 4 |
| SPATA20 | SLC35B2 | 0.65284 | 3 | 0 | 3 |
| SPATA20 | ZFP92 | 0.638234 | 4 | 0 | 3 |
| SPATA20 | SMARCD2 | 0.635219 | 4 | 0 | 4 |
| SPATA20 | WDR81 | 0.633744 | 3 | 0 | 3 |
| SPATA20 | PYCR2 | 0.629917 | 3 | 0 | 3 |
| SPATA20 | TUBA1B | 0.626867 | 3 | 0 | 3 |
| SPATA20 | FNDC1 | 0.624912 | 3 | 0 | 3 |
| SPATA20 | NCOR2 | 0.623872 | 8 | 0 | 7 |
| SPATA20 | NUP210 | 0.620374 | 3 | 0 | 3 |
| SPATA20 | ZBED1 | 0.618399 | 5 | 0 | 4 |
| SPATA20 | BOLA3 | 0.616886 | 3 | 0 | 3 |
| SPATA20 | RAB34 | 0.613272 | 3 | 0 | 3 |
| SPATA20 | PFN1 | 0.612547 | 4 | 0 | 3 |
| SPATA20 | A2M | 0.612247 | 3 | 0 | 3 |
| SPATA20 | RAMP3 | 0.610492 | 4 | 0 | 3 |
| SPATA20 | SPTAN1 | 0.607304 | 3 | 0 | 3 |
| SPATA20 | HHAT | 0.60519 | 3 | 0 | 3 |
| SPATA20 | ZNF275 | 0.603495 | 6 | 0 | 5 |
For details and further investigation, click here
