Full name: SSTR5 antisense RNA 1 | Alias Symbol: | ||
Type: non-coding RNA | Cytoband: 16p13.3 | ||
Entrez ID: 146336 | HGNC ID: HGNC:26502 | Ensembl Gene: ENSG00000261713 | OMIM ID: |
Drug and gene relationship at DGIdb |
Expression of SSTR5-AS1:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | SSTR5-AS1 | 146336 | 1557146_a_at | -0.9838 | 0.1945 | |
GSE26886 | SSTR5-AS1 | 146336 | 1557146_a_at | 0.3208 | 0.0669 | |
GSE45670 | SSTR5-AS1 | 146336 | 1557146_a_at | -0.3443 | 0.3699 | |
GSE53622 | SSTR5-AS1 | 146336 | 54916 | -0.2974 | 0.0505 | |
GSE53624 | SSTR5-AS1 | 146336 | 54916 | -0.1831 | 0.4780 | |
GSE63941 | SSTR5-AS1 | 146336 | 1557146_a_at | 0.9534 | 0.3174 | |
GSE77861 | SSTR5-AS1 | 146336 | 1557146_a_at | -0.0555 | 0.5741 | |
SRP133303 | SSTR5-AS1 | 146336 | RNAseq | -2.2093 | 0.0000 | |
SRP219564 | SSTR5-AS1 | 146336 | RNAseq | -0.2672 | 0.5827 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SSTR5-AS1 expression:
Note: Click image to view full size file.
Copy number change of SSTR5-AS1:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | SSTR5-AS1 | 146336 | 5 | 5 | 20 | |
GSE20123 | SSTR5-AS1 | 146336 | 5 | 4 | 21 | |
GSE43470 | SSTR5-AS1 | 146336 | 4 | 7 | 32 | |
GSE46452 | SSTR5-AS1 | 146336 | 38 | 1 | 20 | |
GSE47630 | SSTR5-AS1 | 146336 | 13 | 6 | 21 | |
GSE54993 | SSTR5-AS1 | 146336 | 3 | 5 | 62 | |
GSE54994 | SSTR5-AS1 | 146336 | 5 | 9 | 39 | |
GSE60625 | SSTR5-AS1 | 146336 | 4 | 0 | 7 | |
GSE74703 | SSTR5-AS1 | 146336 | 4 | 5 | 27 | |
GSE74704 | SSTR5-AS1 | 146336 | 3 | 2 | 15 |
Total number of gains: 84; Total number of losses: 44; Total Number of normals: 264.
Somatic mutations of SSTR5-AS1:
Generating mutation plots.
Highly correlated genes for SSTR5-AS1:
Showing top 20/26 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
SSTR5-AS1 | TFF3 | 0.827081 | 3 | 0 | 3 |
SSTR5-AS1 | AGR3 | 0.813066 | 3 | 0 | 3 |
SSTR5-AS1 | BPIFB1 | 0.768424 | 4 | 0 | 4 |
SSTR5-AS1 | TFF1 | 0.755161 | 4 | 0 | 3 |
SSTR5-AS1 | CHRM1 | 0.738105 | 3 | 0 | 3 |
SSTR5-AS1 | SCGB2A2 | 0.734384 | 3 | 0 | 3 |
SSTR5-AS1 | ZG16B | 0.69811 | 4 | 0 | 3 |
SSTR5-AS1 | SCGB1D2 | 0.697828 | 3 | 0 | 3 |
SSTR5-AS1 | STATH | 0.696482 | 4 | 0 | 3 |
SSTR5-AS1 | PIP | 0.694821 | 3 | 0 | 3 |
SSTR5-AS1 | SCGB3A1 | 0.685845 | 3 | 0 | 3 |
SSTR5-AS1 | TFF2 | 0.675617 | 3 | 0 | 3 |
SSTR5-AS1 | OLFM4 | 0.670352 | 3 | 0 | 3 |
SSTR5-AS1 | KLHDC7A | 0.650048 | 3 | 0 | 3 |
SSTR5-AS1 | IFITM10 | 0.646612 | 3 | 0 | 3 |
SSTR5-AS1 | CAPN9 | 0.627847 | 4 | 0 | 3 |
SSTR5-AS1 | SPATA6L | 0.619215 | 3 | 0 | 3 |
SSTR5-AS1 | DMBT1 | 0.595044 | 4 | 0 | 3 |
SSTR5-AS1 | PPP1R1B | 0.57714 | 3 | 0 | 3 |
SSTR5-AS1 | KLK1 | 0.569146 | 3 | 0 | 3 |
For details and further investigation, click here