TFF3

 

Full name: trefoil factor 3 Alias Symbol: HITF|ITF
Type: protein-coding gene Cytoband: 21q22.3
Entrez ID: 7033 HGNC ID: HGNC:11757 Ensembl Gene: ENSG00000160180 OMIM ID: 600633
Drug and gene relationship at DGIdb

 

Expression of TFF3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TFF3 7033 204623_at -1.8575 0.1942
GSE20347 TFF3 7033 204623_at -0.0029 0.9911
GSE23400 TFF3 7033 204623_at -1.1454 0.0000
GSE26886 TFF3 7033 204623_at 0.3381 0.0534
GSE29001 TFF3 7033 204623_at 0.0104 0.9691
GSE38129 TFF3 7033 204623_at -0.3413 0.2626
GSE45670 TFF3 7033 204623_at -1.5448 0.0052
GSE53622 TFF3 7033 4270 -3.8207 0.0000
GSE53624 TFF3 7033 4270 -3.4617 0.0000
GSE63941 TFF3 7033 204623_at 0.0685 0.8976
GSE77861 TFF3 7033 204623_at -0.0359 0.9031
GSE97050 TFF3 7033 A_23_P393099 -1.5092 0.1806
SRP133303 TFF3 7033 RNAseq -5.6951 0.0000
SRP159526 TFF3 7033 RNAseq -0.9954 0.3938
SRP219564 TFF3 7033 RNAseq -1.7719 0.0371
TCGA TFF3 7033 RNAseq -1.0863 0.0164

Upregulated datasets: 0; Downregulated datasets: 7.  


 

Survival by TFF3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TFF3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TFF3 7033 2 8 20
GSE20123 TFF3 7033 2 8 20
GSE43470 TFF3 7033 0 13 30
GSE46452 TFF3 7033 1 21 37
GSE47630 TFF3 7033 6 17 17
GSE54993 TFF3 7033 8 1 61
GSE54994 TFF3 7033 3 8 42
GSE60625 TFF3 7033 0 0 11
GSE74703 TFF3 7033 0 10 26
GSE74704 TFF3 7033 1 4 15
TCGA TFF3 7033 7 41 48

Total number of gains: 30; Total number of losses: 131; Total Number of normals: 327.  


 

Somatic mutations of TFF3:

 

Generating mutation plots.

 

Highly correlated genes for TFF3:

 

Showing top 20/187 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TFF3BPIFB10.840673606
TFF3C6orf580.832303606
TFF3SSTR5-AS10.827081303
TFF3SCGB1D20.757009707
TFF3NOL40.739278303
TFF3SCGB2A20.735914706
TFF3NKX3-10.730982706
TFF3SCGB3A10.723995605
TFF3CHRM10.722454504
TFF3TSPAN80.72224807
TFF3GP20.719019605
TFF3SCGB2A10.708098604
TFF3C9orf1520.69422605
TFF3MUC5B0.692081108
TFF3AZGP10.6892805
TFF3GLYATL20.686576404
TFF3ZG16B0.671381705
TFF3PEG100.670892303
TFF3PROM10.662325807
TFF3NXPE40.654939704

For details and further investigation, click here