SUCLG1

 

Full name: succinate-CoA ligase alpha subunit Alias Symbol: 
Type: protein-coding gene Cytoband: 2p11.2
Entrez ID: 8802 HGNC ID: HGNC:11449 Ensembl Gene: ENSG00000163541 OMIM ID: 611224
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of SUCLG1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SUCLG1 8802 217874_at -0.4512 0.2256
GSE20347 SUCLG1 8802 217874_at -0.5056 0.0005
GSE23400 SUCLG1 8802 217874_at -0.4224 0.0000
GSE26886 SUCLG1 8802 217874_at -0.8837 0.0000
GSE29001 SUCLG1 8802 217874_at -0.7217 0.0191
GSE38129 SUCLG1 8802 217874_at -0.4157 0.0013
GSE45670 SUCLG1 8802 217874_at -0.2585 0.1011
GSE53622 SUCLG1 8802 39610 -0.7109 0.0000
GSE53624 SUCLG1 8802 39610 -0.7412 0.0000
GSE63941 SUCLG1 8802 217874_at 0.2825 0.4163
GSE77861 SUCLG1 8802 217874_at -0.3614 0.3028
GSE97050 SUCLG1 8802 A_23_P79545 -0.2669 0.4157
SRP007169 SUCLG1 8802 RNAseq -1.4670 0.0001
SRP008496 SUCLG1 8802 RNAseq -1.2205 0.0000
SRP064894 SUCLG1 8802 RNAseq -0.9069 0.0000
SRP133303 SUCLG1 8802 RNAseq -0.4419 0.0041
SRP159526 SUCLG1 8802 RNAseq -0.2348 0.3472
SRP193095 SUCLG1 8802 RNAseq -1.0564 0.0000
SRP219564 SUCLG1 8802 RNAseq -0.7940 0.0129
TCGA SUCLG1 8802 RNAseq -0.1478 0.0018

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SUCLG1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SUCLG1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SUCLG1 8802 8 2 20
GSE20123 SUCLG1 8802 7 2 21
GSE43470 SUCLG1 8802 4 1 38
GSE46452 SUCLG1 8802 2 3 54
GSE47630 SUCLG1 8802 7 0 33
GSE54993 SUCLG1 8802 0 6 64
GSE54994 SUCLG1 8802 10 0 43
GSE60625 SUCLG1 8802 0 3 8
GSE74703 SUCLG1 8802 4 1 31
GSE74704 SUCLG1 8802 5 0 15
TCGA SUCLG1 8802 36 3 57

Total number of gains: 83; Total number of losses: 21; Total Number of normals: 384.  


 

Somatic mutations of SUCLG1:

 

Generating mutation plots.

 

Highly correlated genes for SUCLG1:

 

Showing top 20/1434 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SUCLG1HDHD20.847301303
SUCLG1AKIRIN20.804281303
SUCLG1PPP3CC0.790209303
SUCLG1RBM50.772274303
SUCLG1SLC22A150.759627303
SUCLG1SLC12A60.758382606
SUCLG1ZNF585A0.754779303
SUCLG1CYSRT10.753501505
SUCLG1ZNF518A0.749732303
SUCLG1A2ML10.749274505
SUCLG1TMPRSS11B0.742604505
SUCLG1VSIG10L0.739973505
SUCLG1SLTM0.737062404
SUCLG1GALNT110.733048303
SUCLG1LYNX10.728726505
SUCLG1REV10.724384303
SUCLG1EVC20.722718303
SUCLG1FCHO20.722365606
SUCLG1CA130.718602303
SUCLG1CHCHD100.716736303

For details and further investigation, click here