| Full name: transcription factor 19 | Alias Symbol: SC1 | ||
| Type: protein-coding gene | Cytoband: 6p21.33 | ||
| Entrez ID: 6941 | HGNC ID: HGNC:11629 | Ensembl Gene: ENSG00000137310 | OMIM ID: 600912 |
| Drug and gene relationship at DGIdb | |||
Expression of TCF19:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TCF19 | 6941 | 223274_at | 0.6618 | 0.2708 | |
| GSE26886 | TCF19 | 6941 | 223274_at | 0.0554 | 0.8074 | |
| GSE45670 | TCF19 | 6941 | 223274_at | 0.3126 | 0.1756 | |
| GSE53622 | TCF19 | 6941 | 10761 | 0.6685 | 0.0000 | |
| GSE53624 | TCF19 | 6941 | 10761 | 0.8031 | 0.0000 | |
| GSE63941 | TCF19 | 6941 | 223274_at | 1.0778 | 0.1657 | |
| GSE77861 | TCF19 | 6941 | 223274_at | 0.0262 | 0.9399 | |
| GSE97050 | TCF19 | 6941 | A_24_P349965 | 0.2830 | 0.2462 | |
| SRP007169 | TCF19 | 6941 | RNAseq | 0.0364 | 0.9365 | |
| SRP008496 | TCF19 | 6941 | RNAseq | 0.1379 | 0.6646 | |
| SRP064894 | TCF19 | 6941 | RNAseq | 0.8674 | 0.0066 | |
| SRP133303 | TCF19 | 6941 | RNAseq | 0.7549 | 0.0011 | |
| SRP159526 | TCF19 | 6941 | RNAseq | 0.6414 | 0.0939 | |
| SRP193095 | TCF19 | 6941 | RNAseq | 0.4037 | 0.0009 | |
| SRP219564 | TCF19 | 6941 | RNAseq | -0.1517 | 0.8235 | |
| TCGA | TCF19 | 6941 | RNAseq | 0.4807 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TCF19 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TCF19:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TCF19 | 6941 | 5 | 1 | 24 | |
| GSE20123 | TCF19 | 6941 | 5 | 1 | 24 | |
| GSE43470 | TCF19 | 6941 | 5 | 1 | 37 | |
| GSE46452 | TCF19 | 6941 | 1 | 10 | 48 | |
| GSE47630 | TCF19 | 6941 | 7 | 3 | 30 | |
| GSE54993 | TCF19 | 6941 | 2 | 1 | 67 | |
| GSE54994 | TCF19 | 6941 | 11 | 4 | 38 | |
| GSE60625 | TCF19 | 6941 | 0 | 1 | 10 | |
| GSE74703 | TCF19 | 6941 | 5 | 0 | 31 | |
| GSE74704 | TCF19 | 6941 | 2 | 0 | 18 | |
| TCGA | TCF19 | 6941 | 17 | 16 | 63 |
Total number of gains: 60; Total number of losses: 38; Total Number of normals: 390.
Somatic mutations of TCF19:
Generating mutation plots.
Highly correlated genes for TCF19:
Showing top 20/504 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TCF19 | ZBED4 | 0.799366 | 3 | 0 | 3 |
| TCF19 | CDC42EP1 | 0.782888 | 3 | 0 | 3 |
| TCF19 | ALDH18A1 | 0.769026 | 3 | 0 | 3 |
| TCF19 | SLC10A3 | 0.764931 | 3 | 0 | 3 |
| TCF19 | ARPC5 | 0.764084 | 3 | 0 | 3 |
| TCF19 | PRDM15 | 0.761431 | 3 | 0 | 3 |
| TCF19 | UNC5CL | 0.74918 | 3 | 0 | 3 |
| TCF19 | STK17B | 0.747195 | 3 | 0 | 3 |
| TCF19 | LRRC59 | 0.745999 | 3 | 0 | 3 |
| TCF19 | TSEN34 | 0.732473 | 3 | 0 | 3 |
| TCF19 | IFNGR2 | 0.731373 | 3 | 0 | 3 |
| TCF19 | MVP | 0.730098 | 3 | 0 | 3 |
| TCF19 | VMA21 | 0.726414 | 4 | 0 | 4 |
| TCF19 | DNASE1L1 | 0.722911 | 3 | 0 | 3 |
| TCF19 | UCK2 | 0.722556 | 3 | 0 | 3 |
| TCF19 | MMS22L | 0.713271 | 3 | 0 | 3 |
| TCF19 | MAGOH | 0.711581 | 3 | 0 | 3 |
| TCF19 | SLC25A40 | 0.710996 | 3 | 0 | 3 |
| TCF19 | NOL11 | 0.7109 | 4 | 0 | 4 |
| TCF19 | MGAT2 | 0.709829 | 3 | 0 | 3 |
For details and further investigation, click here
