PRDM15

 

Full name: PR/SET domain 15 Alias Symbol: 
Type: protein-coding gene Cytoband: 21q22.3
Entrez ID: 63977 HGNC ID: HGNC:13999 Ensembl Gene: ENSG00000141956 OMIM ID: 617692
Drug and gene relationship at DGIdb

 

Expression of PRDM15:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRDM15 63977 230777_s_at 0.5230 0.2989
GSE26886 PRDM15 63977 230777_s_at 0.0287 0.9060
GSE45670 PRDM15 63977 230777_s_at 0.4968 0.0001
GSE53622 PRDM15 63977 7951 0.1124 0.1207
GSE53624 PRDM15 63977 7951 0.2161 0.0003
GSE63941 PRDM15 63977 230777_s_at 0.0868 0.7786
GSE77861 PRDM15 63977 230777_s_at 0.1232 0.3043
GSE97050 PRDM15 63977 A_24_P194337 0.4219 0.1628
SRP007169 PRDM15 63977 RNAseq 0.1855 0.6803
SRP008496 PRDM15 63977 RNAseq 0.3202 0.3661
SRP064894 PRDM15 63977 RNAseq 0.6693 0.0006
SRP133303 PRDM15 63977 RNAseq 0.0349 0.8153
SRP159526 PRDM15 63977 RNAseq 0.0221 0.9172
SRP193095 PRDM15 63977 RNAseq 0.2328 0.0608
SRP219564 PRDM15 63977 RNAseq -0.0671 0.8425
TCGA PRDM15 63977 RNAseq 0.0788 0.1919

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PRDM15 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PRDM15:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRDM15 63977 2 8 20
GSE20123 PRDM15 63977 2 8 20
GSE43470 PRDM15 63977 0 13 30
GSE46452 PRDM15 63977 1 21 37
GSE47630 PRDM15 63977 6 17 17
GSE54993 PRDM15 63977 8 1 61
GSE54994 PRDM15 63977 3 8 42
GSE60625 PRDM15 63977 0 0 11
GSE74703 PRDM15 63977 0 10 26
GSE74704 PRDM15 63977 1 4 15
TCGA PRDM15 63977 7 41 48

Total number of gains: 30; Total number of losses: 131; Total Number of normals: 327.  


 

Somatic mutations of PRDM15:

 

Generating mutation plots.

 

Highly correlated genes for PRDM15:

 

Showing top 20/531 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRDM15DPM20.839307303
PRDM15GPR1070.817081303
PRDM15ZNF7650.8025303
PRDM15INTS70.802064303
PRDM15DOCK60.794062303
PRDM15RHBDD10.792328303
PRDM15SRP90.79153303
PRDM15IFT800.789138303
PRDM15E2F30.786406303
PRDM15RPP380.771093303
PRDM15HNRNPF0.77039303
PRDM15CSNK1D0.769687303
PRDM15TCF190.761431303
PRDM15LGALS80.760263303
PRDM15THADA0.757229303
PRDM15SEC16A0.755212404
PRDM15DEDD0.753515303
PRDM15SGSH0.752319303
PRDM15GEN10.752044303
PRDM15LIMK10.749705303

For details and further investigation, click here