| Full name: THUMPD3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p25.3 | ||
| Entrez ID: 440944 | HGNC ID: HGNC:44478 | Ensembl Gene: ENSG00000206573 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of THUMPD3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | THUMPD3-AS1 | 440944 | 232052_at | -0.0718 | 0.9188 | |
| GSE26886 | THUMPD3-AS1 | 440944 | 232052_at | -0.6070 | 0.0168 | |
| GSE45670 | THUMPD3-AS1 | 440944 | 232052_at | -0.0992 | 0.4088 | |
| GSE53622 | THUMPD3-AS1 | 440944 | 5427 | -0.2139 | 0.0194 | |
| GSE53624 | THUMPD3-AS1 | 440944 | 5427 | -0.4139 | 0.0012 | |
| GSE63941 | THUMPD3-AS1 | 440944 | 232052_at | -0.0995 | 0.8203 | |
| GSE77861 | THUMPD3-AS1 | 440944 | 232052_at | 0.0590 | 0.5798 | |
| SRP007169 | THUMPD3-AS1 | 440944 | RNAseq | -0.3615 | 0.4428 | |
| SRP008496 | THUMPD3-AS1 | 440944 | RNAseq | -0.3488 | 0.3165 | |
| SRP064894 | THUMPD3-AS1 | 440944 | RNAseq | -0.2576 | 0.1170 | |
| SRP133303 | THUMPD3-AS1 | 440944 | RNAseq | -0.1657 | 0.3778 | |
| SRP159526 | THUMPD3-AS1 | 440944 | RNAseq | -0.2274 | 0.3917 | |
| SRP193095 | THUMPD3-AS1 | 440944 | RNAseq | -0.3485 | 0.0010 | |
| SRP219564 | THUMPD3-AS1 | 440944 | RNAseq | -0.5464 | 0.0599 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by THUMPD3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of THUMPD3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | THUMPD3-AS1 | 440944 | 1 | 18 | 11 | |
| GSE20123 | THUMPD3-AS1 | 440944 | 1 | 18 | 11 | |
| GSE43470 | THUMPD3-AS1 | 440944 | 0 | 21 | 22 | |
| GSE46452 | THUMPD3-AS1 | 440944 | 2 | 17 | 40 | |
| GSE47630 | THUMPD3-AS1 | 440944 | 3 | 22 | 15 | |
| GSE54993 | THUMPD3-AS1 | 440944 | 6 | 1 | 63 | |
| GSE54994 | THUMPD3-AS1 | 440944 | 3 | 31 | 19 | |
| GSE60625 | THUMPD3-AS1 | 440944 | 5 | 0 | 6 | |
| GSE74703 | THUMPD3-AS1 | 440944 | 0 | 17 | 19 | |
| GSE74704 | THUMPD3-AS1 | 440944 | 1 | 11 | 8 |
Total number of gains: 22; Total number of losses: 156; Total Number of normals: 214.
Somatic mutations of THUMPD3-AS1:
Generating mutation plots.
Highly correlated genes for THUMPD3-AS1:
Showing top 20/27 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| THUMPD3-AS1 | SCRG1 | 0.69337 | 3 | 0 | 3 |
| THUMPD3-AS1 | YJEFN3 | 0.631192 | 3 | 0 | 3 |
| THUMPD3-AS1 | LUC7L3 | 0.623886 | 3 | 0 | 3 |
| THUMPD3-AS1 | UNC5A | 0.620855 | 3 | 0 | 3 |
| THUMPD3-AS1 | SALL3 | 0.614527 | 3 | 0 | 3 |
| THUMPD3-AS1 | RBM39 | 0.612306 | 3 | 0 | 3 |
| THUMPD3-AS1 | ZNF248 | 0.603062 | 3 | 0 | 3 |
| THUMPD3-AS1 | RBM17 | 0.598425 | 3 | 0 | 3 |
| THUMPD3-AS1 | PNISR | 0.585836 | 3 | 0 | 3 |
| THUMPD3-AS1 | FBXO17 | 0.585486 | 3 | 0 | 3 |
| THUMPD3-AS1 | ZNF416 | 0.583491 | 3 | 0 | 3 |
| THUMPD3-AS1 | CREBZF | 0.580585 | 3 | 0 | 3 |
| THUMPD3-AS1 | MUC6 | 0.577851 | 3 | 0 | 3 |
| THUMPD3-AS1 | FAM118A | 0.574027 | 3 | 0 | 3 |
| THUMPD3-AS1 | ZNF667 | 0.572468 | 4 | 0 | 4 |
| THUMPD3-AS1 | VHL | 0.572303 | 4 | 0 | 3 |
| THUMPD3-AS1 | CLYBL | 0.565605 | 3 | 0 | 3 |
| THUMPD3-AS1 | TP53AIP1 | 0.564971 | 3 | 0 | 3 |
| THUMPD3-AS1 | LINC00276 | 0.560109 | 3 | 0 | 3 |
| THUMPD3-AS1 | NR2C2 | 0.543219 | 4 | 0 | 3 |
For details and further investigation, click here
