TMEM129

 

Full name: transmembrane protein 129 Alias Symbol: D4S2561E
Type: protein-coding gene Cytoband: 4p16.3
Entrez ID: 92305 HGNC ID: HGNC:25137 Ensembl Gene: ENSG00000168936 OMIM ID: 615975
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of TMEM129:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM129 92305 225587_at 0.0351 0.9009
GSE26886 TMEM129 92305 225587_at -0.0368 0.8556
GSE45670 TMEM129 92305 225588_s_at -0.3649 0.0213
GSE53622 TMEM129 92305 27334 -0.4692 0.0000
GSE53624 TMEM129 92305 27334 -0.3996 0.0000
GSE63941 TMEM129 92305 225587_at -1.1289 0.0000
GSE77861 TMEM129 92305 225587_at -0.2365 0.2210
GSE97050 TMEM129 92305 A_23_P354175 -0.6653 0.0828
SRP007169 TMEM129 92305 RNAseq -0.7037 0.0759
SRP008496 TMEM129 92305 RNAseq -0.2385 0.5041
SRP064894 TMEM129 92305 RNAseq -0.0229 0.9256
SRP133303 TMEM129 92305 RNAseq -0.5211 0.0004
SRP159526 TMEM129 92305 RNAseq -0.2636 0.1430
SRP193095 TMEM129 92305 RNAseq -0.4980 0.0001
SRP219564 TMEM129 92305 RNAseq -0.1235 0.8224
TCGA TMEM129 92305 RNAseq -0.2927 0.0000

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by TMEM129 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM129:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM129 92305 0 16 14
GSE20123 TMEM129 92305 0 16 14
GSE43470 TMEM129 92305 1 16 26
GSE46452 TMEM129 92305 1 36 22
GSE47630 TMEM129 92305 2 19 19
GSE54993 TMEM129 92305 11 0 59
GSE54994 TMEM129 92305 3 12 38
GSE60625 TMEM129 92305 0 0 11
GSE74703 TMEM129 92305 1 12 23
GSE74704 TMEM129 92305 0 8 12
TCGA TMEM129 92305 9 47 40

Total number of gains: 28; Total number of losses: 182; Total Number of normals: 278.  


 

Somatic mutations of TMEM129:

 

Generating mutation plots.

 

Highly correlated genes for TMEM129:

 

Showing top 20/419 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM129STOML10.864449303
TMEM129SSNA10.830789303
TMEM129SLC24A10.801673303
TMEM129PSKH10.774973303
TMEM129AKT1S10.774427303
TMEM129RAB11FIP50.773337303
TMEM129CNP0.773104303
TMEM129EIF4G30.756481303
TMEM129PGLS0.756407303
TMEM129ARID1B0.74873303
TMEM129GALNT110.748571303
TMEM129EPM2AIP10.745495303
TMEM129ELF20.744829303
TMEM129LBX10.744708303
TMEM129KIAA11430.73909303
TMEM129MED250.738531303
TMEM129MAPK70.735213303
TMEM129CCDC970.732997303
TMEM129NDUFA30.726832303
TMEM129ARHGAP310.726206303

For details and further investigation, click here