| Full name: SS nuclear autoantigen 1 | Alias Symbol: NA14|N14 | ||
| Type: protein-coding gene | Cytoband: 9q34.3 | ||
| Entrez ID: 8636 | HGNC ID: HGNC:11321 | Ensembl Gene: ENSG00000176101 | OMIM ID: 610882 |
| Drug and gene relationship at DGIdb | |||
Expression of SSNA1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SSNA1 | 8636 | 210378_s_at | -0.0675 | 0.9072 | |
| GSE20347 | SSNA1 | 8636 | 210378_s_at | -0.2747 | 0.0221 | |
| GSE23400 | SSNA1 | 8636 | 210378_s_at | -0.0274 | 0.6136 | |
| GSE26886 | SSNA1 | 8636 | 210378_s_at | 0.0726 | 0.5987 | |
| GSE29001 | SSNA1 | 8636 | 210378_s_at | -0.2284 | 0.0533 | |
| GSE38129 | SSNA1 | 8636 | 210378_s_at | -0.1170 | 0.3566 | |
| GSE45670 | SSNA1 | 8636 | 210378_s_at | -0.0337 | 0.8031 | |
| GSE53622 | SSNA1 | 8636 | 14976 | -0.0799 | 0.2868 | |
| GSE53624 | SSNA1 | 8636 | 14976 | 0.0391 | 0.6311 | |
| GSE63941 | SSNA1 | 8636 | 210378_s_at | 0.6138 | 0.0333 | |
| GSE77861 | SSNA1 | 8636 | 210378_s_at | -0.1493 | 0.3906 | |
| GSE97050 | SSNA1 | 8636 | A_23_P159476 | -0.1480 | 0.6160 | |
| SRP007169 | SSNA1 | 8636 | RNAseq | -1.0310 | 0.0037 | |
| SRP008496 | SSNA1 | 8636 | RNAseq | -1.0561 | 0.0000 | |
| SRP064894 | SSNA1 | 8636 | RNAseq | 0.6898 | 0.0745 | |
| SRP133303 | SSNA1 | 8636 | RNAseq | -0.1958 | 0.2450 | |
| SRP159526 | SSNA1 | 8636 | RNAseq | -0.1538 | 0.3878 | |
| SRP193095 | SSNA1 | 8636 | RNAseq | -0.4060 | 0.0005 | |
| SRP219564 | SSNA1 | 8636 | RNAseq | 0.0902 | 0.8051 | |
| TCGA | SSNA1 | 8636 | RNAseq | 0.0872 | 0.1650 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by SSNA1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SSNA1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SSNA1 | 8636 | 5 | 7 | 18 | |
| GSE20123 | SSNA1 | 8636 | 5 | 7 | 18 | |
| GSE43470 | SSNA1 | 8636 | 3 | 7 | 33 | |
| GSE46452 | SSNA1 | 8636 | 6 | 13 | 40 | |
| GSE47630 | SSNA1 | 8636 | 6 | 15 | 19 | |
| GSE54993 | SSNA1 | 8636 | 3 | 3 | 64 | |
| GSE54994 | SSNA1 | 8636 | 12 | 8 | 33 | |
| GSE60625 | SSNA1 | 8636 | 0 | 0 | 11 | |
| GSE74703 | SSNA1 | 8636 | 3 | 5 | 28 | |
| GSE74704 | SSNA1 | 8636 | 3 | 5 | 12 | |
| TCGA | SSNA1 | 8636 | 29 | 23 | 44 |
Total number of gains: 75; Total number of losses: 93; Total Number of normals: 320.
Somatic mutations of SSNA1:
Generating mutation plots.
Highly correlated genes for SSNA1:
Showing top 20/405 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SSNA1 | TMEM129 | 0.830789 | 3 | 0 | 3 |
| SSNA1 | STAT6 | 0.817239 | 3 | 0 | 3 |
| SSNA1 | SUFU | 0.772863 | 3 | 0 | 3 |
| SSNA1 | TCTN1 | 0.762852 | 3 | 0 | 3 |
| SSNA1 | LIMD2 | 0.733232 | 3 | 0 | 3 |
| SSNA1 | CD2BP2 | 0.730996 | 3 | 0 | 3 |
| SSNA1 | PDK2 | 0.730787 | 3 | 0 | 3 |
| SSNA1 | SNCG | 0.727341 | 3 | 0 | 3 |
| SSNA1 | OGG1 | 0.726559 | 3 | 0 | 3 |
| SSNA1 | DOC2B | 0.725413 | 3 | 0 | 3 |
| SSNA1 | TRIM33 | 0.723662 | 3 | 0 | 3 |
| SSNA1 | MCCC1 | 0.723529 | 3 | 0 | 3 |
| SSNA1 | AHSP | 0.722045 | 3 | 0 | 3 |
| SSNA1 | BCAP29 | 0.72026 | 3 | 0 | 3 |
| SSNA1 | CLEC14A | 0.713313 | 3 | 0 | 3 |
| SSNA1 | ATP1A4 | 0.712079 | 3 | 0 | 3 |
| SSNA1 | ADCK1 | 0.703359 | 3 | 0 | 3 |
| SSNA1 | ORMDL3 | 0.703195 | 3 | 0 | 3 |
| SSNA1 | RBM18 | 0.701729 | 3 | 0 | 3 |
| SSNA1 | MECOM | 0.696124 | 3 | 0 | 3 |
For details and further investigation, click here
