SLC24A1

 

Full name: solute carrier family 24 member 1 Alias Symbol: NCKX1|NCKX|RODX|KIAA0702|HsT17412|CSNB1D
Type: protein-coding gene Cytoband: 15q22.31
Entrez ID: 9187 HGNC ID: HGNC:10975 Ensembl Gene: ENSG00000074621 OMIM ID: 603617
Drug and gene relationship at DGIdb

 

Expression of SLC24A1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC24A1 9187 206081_at -0.0887 0.8915
GSE20347 SLC24A1 9187 206081_at -0.0326 0.8413
GSE23400 SLC24A1 9187 211842_s_at 0.0341 0.2780
GSE26886 SLC24A1 9187 206081_at 0.1081 0.7801
GSE29001 SLC24A1 9187 206081_at -0.0160 0.9580
GSE38129 SLC24A1 9187 206081_at -0.0422 0.7566
GSE45670 SLC24A1 9187 206081_at -0.0070 0.9806
GSE53622 SLC24A1 9187 44635 0.1276 0.1403
GSE53624 SLC24A1 9187 83842 -0.1465 0.3705
GSE63941 SLC24A1 9187 206081_at -1.1368 0.0165
GSE77861 SLC24A1 9187 210420_at -0.0950 0.6031
GSE97050 SLC24A1 9187 A_33_P3417670 -0.2934 0.3673
SRP007169 SLC24A1 9187 RNAseq 1.2643 0.0522
SRP064894 SLC24A1 9187 RNAseq 0.1544 0.4138
SRP133303 SLC24A1 9187 RNAseq -0.2914 0.0839
SRP159526 SLC24A1 9187 RNAseq -0.1682 0.5121
SRP193095 SLC24A1 9187 RNAseq 0.2137 0.0954
SRP219564 SLC24A1 9187 RNAseq 0.2136 0.6026
TCGA SLC24A1 9187 RNAseq -0.0904 0.1496

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SLC24A1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC24A1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC24A1 9187 6 4 20
GSE20123 SLC24A1 9187 7 3 20
GSE43470 SLC24A1 9187 4 6 33
GSE46452 SLC24A1 9187 3 7 49
GSE47630 SLC24A1 9187 8 10 22
GSE54993 SLC24A1 9187 5 6 59
GSE54994 SLC24A1 9187 6 7 40
GSE60625 SLC24A1 9187 4 0 7
GSE74703 SLC24A1 9187 4 3 29
GSE74704 SLC24A1 9187 3 3 14
TCGA SLC24A1 9187 9 16 71

Total number of gains: 59; Total number of losses: 65; Total Number of normals: 364.  


 

Somatic mutations of SLC24A1:

 

Generating mutation plots.

 

Highly correlated genes for SLC24A1:

 

Showing top 20/309 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC24A1TMEM1290.801673303
SLC24A1HLCS0.753702303
SLC24A1IFNAR10.752213303
SLC24A1ZIK10.749395303
SLC24A1LACTB0.745236303
SLC24A1ARHGAP240.744034303
SLC24A1CCNY0.739767303
SLC24A1CREB3L20.723024303
SLC24A1AP1AR0.718593303
SLC24A1PCGF60.717551303
SLC24A1BCKDK0.71112303
SLC24A1TOMM220.711039303
SLC24A1AKIRIN10.700264303
SLC24A1MAPK90.700195303
SLC24A1LDOC10.698648303
SLC24A1RPS19BP10.696648303
SLC24A1AKR7A20.696026303
SLC24A1GIMAP80.695484303
SLC24A1PLEKHA40.691975303
SLC24A1SMG80.689016303

For details and further investigation, click here