| Full name: trafficking protein particle complex 6A | Alias Symbol: TRS33|MGC2650|HSPC289 | ||
| Type: protein-coding gene | Cytoband: 19q13.32 | ||
| Entrez ID: 79090 | HGNC ID: HGNC:23069 | Ensembl Gene: ENSG00000007255 | OMIM ID: 610396 |
| Drug and gene relationship at DGIdb | |||
Expression of TRAPPC6A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRAPPC6A | 79090 | 204985_s_at | -0.0420 | 0.9661 | |
| GSE20347 | TRAPPC6A | 79090 | 204985_s_at | 0.1353 | 0.5278 | |
| GSE23400 | TRAPPC6A | 79090 | 204985_s_at | 0.3368 | 0.0013 | |
| GSE26886 | TRAPPC6A | 79090 | 204985_s_at | 0.5040 | 0.0604 | |
| GSE29001 | TRAPPC6A | 79090 | 204985_s_at | 0.1345 | 0.7684 | |
| GSE38129 | TRAPPC6A | 79090 | 204985_s_at | 0.2155 | 0.1432 | |
| GSE45670 | TRAPPC6A | 79090 | 204985_s_at | -0.2412 | 0.3284 | |
| GSE53622 | TRAPPC6A | 79090 | 25288 | 0.1095 | 0.1489 | |
| GSE53624 | TRAPPC6A | 79090 | 25288 | 0.1072 | 0.1282 | |
| GSE63941 | TRAPPC6A | 79090 | 204985_s_at | 1.6413 | 0.0164 | |
| GSE77861 | TRAPPC6A | 79090 | 204985_s_at | 0.3426 | 0.3374 | |
| GSE97050 | TRAPPC6A | 79090 | A_24_P390928 | -0.0508 | 0.8339 | |
| SRP007169 | TRAPPC6A | 79090 | RNAseq | -0.1702 | 0.7820 | |
| SRP008496 | TRAPPC6A | 79090 | RNAseq | 0.1293 | 0.7193 | |
| SRP064894 | TRAPPC6A | 79090 | RNAseq | 0.4754 | 0.2359 | |
| SRP133303 | TRAPPC6A | 79090 | RNAseq | 0.0642 | 0.7553 | |
| SRP159526 | TRAPPC6A | 79090 | RNAseq | 0.4875 | 0.1157 | |
| SRP193095 | TRAPPC6A | 79090 | RNAseq | -0.3936 | 0.0070 | |
| SRP219564 | TRAPPC6A | 79090 | RNAseq | -0.3204 | 0.3885 | |
| TCGA | TRAPPC6A | 79090 | RNAseq | -0.0520 | 0.6801 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TRAPPC6A expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRAPPC6A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRAPPC6A | 79090 | 4 | 5 | 21 | |
| GSE20123 | TRAPPC6A | 79090 | 4 | 4 | 22 | |
| GSE43470 | TRAPPC6A | 79090 | 3 | 11 | 29 | |
| GSE46452 | TRAPPC6A | 79090 | 45 | 1 | 13 | |
| GSE47630 | TRAPPC6A | 79090 | 8 | 6 | 26 | |
| GSE54993 | TRAPPC6A | 79090 | 17 | 4 | 49 | |
| GSE54994 | TRAPPC6A | 79090 | 6 | 12 | 35 | |
| GSE60625 | TRAPPC6A | 79090 | 9 | 0 | 2 | |
| GSE74703 | TRAPPC6A | 79090 | 3 | 7 | 26 | |
| GSE74704 | TRAPPC6A | 79090 | 4 | 2 | 14 | |
| TCGA | TRAPPC6A | 79090 | 14 | 17 | 65 |
Total number of gains: 117; Total number of losses: 69; Total Number of normals: 302.
Somatic mutations of TRAPPC6A:
Generating mutation plots.
Highly correlated genes for TRAPPC6A:
Showing top 20/128 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRAPPC6A | AP1M1 | 0.730927 | 3 | 0 | 3 |
| TRAPPC6A | UBXN11 | 0.686106 | 3 | 0 | 3 |
| TRAPPC6A | RNF157-AS1 | 0.68267 | 3 | 0 | 3 |
| TRAPPC6A | ADAP1 | 0.681577 | 3 | 0 | 3 |
| TRAPPC6A | DNPH1 | 0.672058 | 3 | 0 | 3 |
| TRAPPC6A | CCDC130 | 0.663533 | 4 | 0 | 4 |
| TRAPPC6A | HOXA11 | 0.659773 | 3 | 0 | 3 |
| TRAPPC6A | CABP4 | 0.650981 | 3 | 0 | 3 |
| TRAPPC6A | DPF1 | 0.645846 | 3 | 0 | 3 |
| TRAPPC6A | ZNF511 | 0.645553 | 4 | 0 | 3 |
| TRAPPC6A | PTGIR | 0.644602 | 3 | 0 | 3 |
| TRAPPC6A | FUT1 | 0.644017 | 4 | 0 | 3 |
| TRAPPC6A | REM2 | 0.639522 | 4 | 0 | 3 |
| TRAPPC6A | LRSAM1 | 0.637264 | 3 | 0 | 3 |
| TRAPPC6A | TFAP2C | 0.635396 | 3 | 0 | 3 |
| TRAPPC6A | GTF2IRD2 | 0.634019 | 4 | 0 | 3 |
| TRAPPC6A | TMEM102 | 0.63261 | 3 | 0 | 3 |
| TRAPPC6A | LAT | 0.629517 | 3 | 0 | 3 |
| TRAPPC6A | RAB40B | 0.623686 | 5 | 0 | 4 |
| TRAPPC6A | E2F1 | 0.619417 | 4 | 0 | 3 |
For details and further investigation, click here
