ADAP1

 

Full name: ArfGAP with dual PH domains 1 Alias Symbol: GCS1L
Type: protein-coding gene Cytoband: 7p22.3
Entrez ID: 11033 HGNC ID: HGNC:16486 Ensembl Gene: ENSG00000105963 OMIM ID: 608114
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ADAP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ADAP1 11033 90265_at -0.2660 0.4616
GSE20347 ADAP1 11033 90265_at 0.0299 0.8621
GSE23400 ADAP1 11033 90265_at -0.0663 0.3252
GSE26886 ADAP1 11033 90265_at 0.8463 0.0049
GSE29001 ADAP1 11033 90265_at -0.1808 0.5270
GSE38129 ADAP1 11033 90265_at -0.1076 0.4786
GSE45670 ADAP1 11033 90265_at -0.0326 0.8891
GSE53622 ADAP1 11033 18052 -0.1150 0.2839
GSE53624 ADAP1 11033 18052 0.1155 0.1813
GSE63941 ADAP1 11033 90265_at 1.5544 0.0100
GSE77861 ADAP1 11033 90265_at 0.2918 0.0805
GSE97050 ADAP1 11033 A_33_P3422133 -0.0821 0.6986
SRP007169 ADAP1 11033 RNAseq -0.6760 0.1473
SRP064894 ADAP1 11033 RNAseq -0.2361 0.5320
SRP133303 ADAP1 11033 RNAseq -0.0485 0.8992
SRP159526 ADAP1 11033 RNAseq 0.6429 0.0875
SRP193095 ADAP1 11033 RNAseq -0.0546 0.8889
SRP219564 ADAP1 11033 RNAseq -0.3375 0.6475
TCGA ADAP1 11033 RNAseq -0.3584 0.0033

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ADAP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ADAP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ADAP1 11033 14 0 16
GSE20123 ADAP1 11033 14 0 16
GSE43470 ADAP1 11033 6 2 35
GSE46452 ADAP1 11033 13 1 45
GSE47630 ADAP1 11033 12 1 27
GSE54993 ADAP1 11033 3 10 57
GSE54994 ADAP1 11033 20 3 30
GSE60625 ADAP1 11033 0 0 11
GSE74703 ADAP1 11033 6 1 29
GSE74704 ADAP1 11033 9 0 11
TCGA ADAP1 11033 56 6 34

Total number of gains: 153; Total number of losses: 24; Total Number of normals: 311.  


 

Somatic mutations of ADAP1:

 

Generating mutation plots.

 

Highly correlated genes for ADAP1:

 

Showing top 20/485 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ADAP1BMF0.802562303
ADAP1C20orf1440.781597303
ADAP1ITGA100.767947303
ADAP1FHAD10.764969303
ADAP1SP80.764651404
ADAP1EFNB10.762403303
ADAP1CCDC570.756426303
ADAP1GPSM30.75513303
ADAP1KAT2A0.746047404
ADAP1SOX120.744421303
ADAP1FUZ0.743658303
ADAP1FOXL20.736031303
ADAP1LRSAM10.733028303
ADAP1SPTBN40.731935403
ADAP1GSDMD0.730557303
ADAP1CABP40.728377505
ADAP1MUC80.726966403
ADAP1OR1F10.72488404
ADAP1CACTIN0.721405404
ADAP1SDK10.71984303

For details and further investigation, click here