| Full name: tRNA selenocysteine 1 associated protein 1 | Alias Symbol: SECP43|FLJ20503 | ||
| Type: protein-coding gene | Cytoband: 1p35.3 | ||
| Entrez ID: 54952 | HGNC ID: HGNC:30813 | Ensembl Gene: ENSG00000180098 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of TRNAU1AP:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRNAU1AP | 54952 | 218977_s_at | -0.1098 | 0.6816 | |
| GSE20347 | TRNAU1AP | 54952 | 218977_s_at | -0.2066 | 0.1345 | |
| GSE23400 | TRNAU1AP | 54952 | 218977_s_at | -0.1277 | 0.0225 | |
| GSE26886 | TRNAU1AP | 54952 | 218977_s_at | 0.1248 | 0.5504 | |
| GSE29001 | TRNAU1AP | 54952 | 218977_s_at | -0.2369 | 0.4186 | |
| GSE38129 | TRNAU1AP | 54952 | 218977_s_at | -0.1314 | 0.2788 | |
| GSE45670 | TRNAU1AP | 54952 | 218977_s_at | -0.1385 | 0.3428 | |
| GSE53622 | TRNAU1AP | 54952 | 74712 | 0.1799 | 0.0380 | |
| GSE53624 | TRNAU1AP | 54952 | 74712 | -0.1021 | 0.1549 | |
| GSE63941 | TRNAU1AP | 54952 | 218977_s_at | -0.1578 | 0.7791 | |
| GSE77861 | TRNAU1AP | 54952 | 218977_s_at | -0.3269 | 0.0702 | |
| GSE97050 | TRNAU1AP | 54952 | A_24_P96762 | -0.2065 | 0.3252 | |
| SRP007169 | TRNAU1AP | 54952 | RNAseq | -0.9633 | 0.0321 | |
| SRP008496 | TRNAU1AP | 54952 | RNAseq | -0.9375 | 0.0007 | |
| SRP064894 | TRNAU1AP | 54952 | RNAseq | 0.1896 | 0.3745 | |
| SRP133303 | TRNAU1AP | 54952 | RNAseq | 0.0843 | 0.6122 | |
| SRP159526 | TRNAU1AP | 54952 | RNAseq | -0.6764 | 0.0066 | |
| SRP193095 | TRNAU1AP | 54952 | RNAseq | -0.2588 | 0.0056 | |
| SRP219564 | TRNAU1AP | 54952 | RNAseq | -0.6952 | 0.0144 | |
| TCGA | TRNAU1AP | 54952 | RNAseq | 0.0497 | 0.4643 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRNAU1AP expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRNAU1AP:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRNAU1AP | 54952 | 0 | 6 | 24 | |
| GSE20123 | TRNAU1AP | 54952 | 0 | 5 | 25 | |
| GSE43470 | TRNAU1AP | 54952 | 3 | 6 | 34 | |
| GSE46452 | TRNAU1AP | 54952 | 5 | 1 | 53 | |
| GSE47630 | TRNAU1AP | 54952 | 8 | 3 | 29 | |
| GSE54993 | TRNAU1AP | 54952 | 2 | 1 | 67 | |
| GSE54994 | TRNAU1AP | 54952 | 10 | 4 | 39 | |
| GSE60625 | TRNAU1AP | 54952 | 0 | 0 | 11 | |
| GSE74703 | TRNAU1AP | 54952 | 2 | 4 | 30 | |
| GSE74704 | TRNAU1AP | 54952 | 0 | 0 | 20 | |
| TCGA | TRNAU1AP | 54952 | 11 | 22 | 63 |
Total number of gains: 41; Total number of losses: 52; Total Number of normals: 395.
Somatic mutations of TRNAU1AP:
Generating mutation plots.
Highly correlated genes for TRNAU1AP:
Showing top 20/175 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRNAU1AP | ZNF248 | 0.78179 | 3 | 0 | 3 |
| TRNAU1AP | ALG11 | 0.753843 | 3 | 0 | 3 |
| TRNAU1AP | KRTAP12-2 | 0.752065 | 3 | 0 | 3 |
| TRNAU1AP | TMEM38A | 0.731265 | 3 | 0 | 3 |
| TRNAU1AP | WDR27 | 0.725617 | 3 | 0 | 3 |
| TRNAU1AP | SPEG | 0.725554 | 3 | 0 | 3 |
| TRNAU1AP | C16orf86 | 0.720657 | 3 | 0 | 3 |
| TRNAU1AP | N4BP1 | 0.713803 | 3 | 0 | 3 |
| TRNAU1AP | ACSL3 | 0.712983 | 3 | 0 | 3 |
| TRNAU1AP | GPBP1 | 0.708621 | 3 | 0 | 3 |
| TRNAU1AP | NANOS3 | 0.708082 | 3 | 0 | 3 |
| TRNAU1AP | PPP1R3B | 0.704459 | 3 | 0 | 3 |
| TRNAU1AP | CAMK2D | 0.691166 | 4 | 0 | 4 |
| TRNAU1AP | OR1L6 | 0.688841 | 3 | 0 | 3 |
| TRNAU1AP | CFDP1 | 0.682413 | 3 | 0 | 3 |
| TRNAU1AP | PCA3 | 0.68 | 3 | 0 | 3 |
| TRNAU1AP | BARHL1 | 0.677547 | 3 | 0 | 3 |
| TRNAU1AP | DHRS3 | 0.67686 | 4 | 0 | 4 |
| TRNAU1AP | RGPD6 | 0.669019 | 3 | 0 | 3 |
| TRNAU1AP | MPP5 | 0.668187 | 6 | 0 | 5 |
For details and further investigation, click here
