N4BP1

 

Full name: NEDD4 binding protein 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 16q12.1
Entrez ID: 9683 HGNC ID: HGNC:29850 Ensembl Gene: ENSG00000102921 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of N4BP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 N4BP1 9683 32069_at 0.0447 0.9678
GSE20347 N4BP1 9683 32069_at -0.3730 0.0176
GSE23400 N4BP1 9683 48612_at -0.0462 0.1426
GSE26886 N4BP1 9683 32069_at -0.6187 0.0132
GSE29001 N4BP1 9683 32069_at -0.3131 0.3547
GSE38129 N4BP1 9683 32069_at -0.0735 0.7262
GSE45670 N4BP1 9683 32069_at 0.3282 0.0100
GSE63941 N4BP1 9683 32069_at -0.3735 0.4514
GSE77861 N4BP1 9683 48612_at 0.0970 0.4923
GSE97050 N4BP1 9683 A_23_P432610 0.0227 0.9216
SRP007169 N4BP1 9683 RNAseq -0.7290 0.1389
SRP008496 N4BP1 9683 RNAseq -0.9948 0.0007
SRP064894 N4BP1 9683 RNAseq -0.8624 0.0000
SRP133303 N4BP1 9683 RNAseq 0.1255 0.5644
SRP159526 N4BP1 9683 RNAseq -0.7835 0.0227
SRP193095 N4BP1 9683 RNAseq -0.4236 0.0121
SRP219564 N4BP1 9683 RNAseq -0.6741 0.2195
TCGA N4BP1 9683 RNAseq 0.0812 0.1235

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by N4BP1 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of N4BP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 N4BP1 9683 2 1 27
GSE20123 N4BP1 9683 2 1 27
GSE43470 N4BP1 9683 2 7 34
GSE46452 N4BP1 9683 38 1 20
GSE47630 N4BP1 9683 11 7 22
GSE54993 N4BP1 9683 2 5 63
GSE54994 N4BP1 9683 6 10 37
GSE60625 N4BP1 9683 4 0 7
GSE74703 N4BP1 9683 2 4 30
GSE74704 N4BP1 9683 2 1 17
TCGA N4BP1 9683 28 12 56

Total number of gains: 99; Total number of losses: 49; Total Number of normals: 340.  


 

Somatic mutations of N4BP1:

 

Generating mutation plots.

 

Highly correlated genes for N4BP1:

 

Showing top 20/338 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
N4BP1AZI20.771672303
N4BP1METTL150.744754303
N4BP1TP53AIP10.734443303
N4BP1XIAP0.734223404
N4BP1SEC61G0.729344303
N4BP1USP320.725701605
N4BP1RMDN10.715439404
N4BP1TRNAU1AP0.713803303
N4BP1THAP20.710884404
N4BP1UBE2H0.71084303
N4BP1FEM1C0.70802303
N4BP1SESN20.705071303
N4BP1WASL0.703543303
N4BP1SIX50.687924303
N4BP1USP430.687133303
N4BP1PSMB70.68671303
N4BP1BTBD70.679832404
N4BP1RNF240.675193303
N4BP1RASAL20.674907504
N4BP1STX40.670336303

For details and further investigation, click here