| Full name: WD repeat domain, phosphoinositide interacting 1 | Alias Symbol: FLJ10055|WIPI49|ATG18|ATG18A | ||
| Type: protein-coding gene | Cytoband: 17q24.2 | ||
| Entrez ID: 55062 | HGNC ID: HGNC:25471 | Ensembl Gene: ENSG00000070540 | OMIM ID: 609224 |
Expression of WIPI1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | WIPI1 | 55062 | 213836_s_at | 0.6616 | 0.1301 | |
| GSE20347 | WIPI1 | 55062 | 213836_s_at | 0.3099 | 0.1898 | |
| GSE23400 | WIPI1 | 55062 | 213836_s_at | 0.3599 | 0.0005 | |
| GSE26886 | WIPI1 | 55062 | 213836_s_at | 0.1753 | 0.6637 | |
| GSE29001 | WIPI1 | 55062 | 213836_s_at | 0.4660 | 0.2117 | |
| GSE38129 | WIPI1 | 55062 | 213836_s_at | 0.3052 | 0.0981 | |
| GSE45670 | WIPI1 | 55062 | 213836_s_at | 0.1313 | 0.6679 | |
| GSE63941 | WIPI1 | 55062 | 213836_s_at | -2.3481 | 0.0473 | |
| GSE77861 | WIPI1 | 55062 | 203827_at | 0.5735 | 0.0986 | |
| GSE97050 | WIPI1 | 55062 | A_23_P141394 | 0.1238 | 0.5544 | |
| SRP007169 | WIPI1 | 55062 | RNAseq | 0.3799 | 0.4570 | |
| SRP008496 | WIPI1 | 55062 | RNAseq | 0.4303 | 0.2408 | |
| SRP064894 | WIPI1 | 55062 | RNAseq | 0.4667 | 0.0837 | |
| SRP133303 | WIPI1 | 55062 | RNAseq | 0.7351 | 0.0086 | |
| SRP159526 | WIPI1 | 55062 | RNAseq | 0.9218 | 0.0444 | |
| SRP193095 | WIPI1 | 55062 | RNAseq | 0.6526 | 0.0000 | |
| SRP219564 | WIPI1 | 55062 | RNAseq | 0.6921 | 0.0136 | |
| TCGA | WIPI1 | 55062 | RNAseq | -0.1381 | 0.1189 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by WIPI1 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of WIPI1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | WIPI1 | 55062 | 3 | 2 | 25 | |
| GSE20123 | WIPI1 | 55062 | 3 | 2 | 25 | |
| GSE43470 | WIPI1 | 55062 | 4 | 0 | 39 | |
| GSE46452 | WIPI1 | 55062 | 31 | 1 | 27 | |
| GSE47630 | WIPI1 | 55062 | 7 | 1 | 32 | |
| GSE54993 | WIPI1 | 55062 | 2 | 5 | 63 | |
| GSE54994 | WIPI1 | 55062 | 9 | 4 | 40 | |
| GSE60625 | WIPI1 | 55062 | 4 | 2 | 5 | |
| GSE74703 | WIPI1 | 55062 | 4 | 0 | 32 | |
| GSE74704 | WIPI1 | 55062 | 3 | 1 | 16 | |
| TCGA | WIPI1 | 55062 | 28 | 9 | 59 |
Total number of gains: 98; Total number of losses: 27; Total Number of normals: 363.
Somatic mutations of WIPI1:
Generating mutation plots.
Highly correlated genes for WIPI1:
Showing top 20/326 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| WIPI1 | MED27 | 0.829624 | 3 | 0 | 3 |
| WIPI1 | UHRF1BP1 | 0.802017 | 3 | 0 | 3 |
| WIPI1 | RAB11FIP5 | 0.785558 | 3 | 0 | 3 |
| WIPI1 | LASP1 | 0.763339 | 3 | 0 | 3 |
| WIPI1 | VPS16 | 0.75872 | 3 | 0 | 3 |
| WIPI1 | CEP97 | 0.757334 | 3 | 0 | 3 |
| WIPI1 | SPRED1 | 0.751931 | 3 | 0 | 3 |
| WIPI1 | MAZ | 0.747888 | 3 | 0 | 3 |
| WIPI1 | PSME3 | 0.746148 | 3 | 0 | 3 |
| WIPI1 | LIPG | 0.743729 | 3 | 0 | 3 |
| WIPI1 | PALB2 | 0.737134 | 3 | 0 | 3 |
| WIPI1 | CCNE1 | 0.736807 | 3 | 0 | 3 |
| WIPI1 | CYP27C1 | 0.7296 | 3 | 0 | 3 |
| WIPI1 | RGS19 | 0.727291 | 3 | 0 | 3 |
| WIPI1 | TSPAN17 | 0.725146 | 4 | 0 | 4 |
| WIPI1 | SEC22A | 0.724794 | 3 | 0 | 3 |
| WIPI1 | MRPL51 | 0.721888 | 3 | 0 | 3 |
| WIPI1 | RIOK1 | 0.716135 | 3 | 0 | 3 |
| WIPI1 | TMSB10 | 0.712789 | 3 | 0 | 3 |
| WIPI1 | RNF149 | 0.712592 | 3 | 0 | 3 |
For details and further investigation, click here
