| Full name: tetratricopeptide repeat domain 30B | Alias Symbol: FLJ30990|fleer|IFT70B | ||
| Type: protein-coding gene | Cytoband: 2q31.2 | ||
| Entrez ID: 150737 | HGNC ID: HGNC:26425 | Ensembl Gene: ENSG00000196659 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TTC30B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TTC30B | 150737 | 1554588_a_at | 0.3449 | 0.6252 | |
| GSE26886 | TTC30B | 150737 | 1554588_a_at | 1.0623 | 0.0015 | |
| GSE45670 | TTC30B | 150737 | 1554588_a_at | 0.9494 | 0.0001 | |
| GSE53622 | TTC30B | 150737 | 81090 | 0.7443 | 0.0000 | |
| GSE53624 | TTC30B | 150737 | 81090 | 0.7307 | 0.0000 | |
| GSE63941 | TTC30B | 150737 | 1554588_a_at | 1.3668 | 0.0494 | |
| GSE77861 | TTC30B | 150737 | 243413_at | 0.1085 | 0.3034 | |
| GSE97050 | TTC30B | 150737 | A_23_P408913 | 0.2235 | 0.4958 | |
| SRP007169 | TTC30B | 150737 | RNAseq | -0.4702 | 0.3788 | |
| SRP008496 | TTC30B | 150737 | RNAseq | 0.0048 | 0.9875 | |
| SRP064894 | TTC30B | 150737 | RNAseq | 0.3444 | 0.1414 | |
| SRP133303 | TTC30B | 150737 | RNAseq | 0.6801 | 0.0097 | |
| SRP159526 | TTC30B | 150737 | RNAseq | 0.6479 | 0.0628 | |
| SRP193095 | TTC30B | 150737 | RNAseq | 0.3645 | 0.0516 | |
| SRP219564 | TTC30B | 150737 | RNAseq | 0.4739 | 0.3674 | |
| TCGA | TTC30B | 150737 | RNAseq | 0.1595 | 0.0622 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by TTC30B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TTC30B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TTC30B | 150737 | 11 | 0 | 19 | |
| GSE20123 | TTC30B | 150737 | 10 | 0 | 20 | |
| GSE43470 | TTC30B | 150737 | 5 | 1 | 37 | |
| GSE46452 | TTC30B | 150737 | 1 | 4 | 54 | |
| GSE47630 | TTC30B | 150737 | 4 | 4 | 32 | |
| GSE54993 | TTC30B | 150737 | 0 | 5 | 65 | |
| GSE54994 | TTC30B | 150737 | 11 | 4 | 38 | |
| GSE60625 | TTC30B | 150737 | 0 | 3 | 8 | |
| GSE74703 | TTC30B | 150737 | 4 | 1 | 31 | |
| GSE74704 | TTC30B | 150737 | 6 | 0 | 14 | |
| TCGA | TTC30B | 150737 | 28 | 6 | 62 |
Total number of gains: 80; Total number of losses: 28; Total Number of normals: 380.
Somatic mutations of TTC30B:
Generating mutation plots.
Highly correlated genes for TTC30B:
Showing top 20/987 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TTC30B | TGDS | 0.836476 | 3 | 0 | 3 |
| TTC30B | GAS2L1 | 0.785045 | 3 | 0 | 3 |
| TTC30B | RNF6 | 0.775 | 3 | 0 | 3 |
| TTC30B | CHCHD6 | 0.774801 | 4 | 0 | 4 |
| TTC30B | TAOK1 | 0.7664 | 3 | 0 | 3 |
| TTC30B | TSPAN17 | 0.762176 | 3 | 0 | 3 |
| TTC30B | PMS2 | 0.760484 | 3 | 0 | 3 |
| TTC30B | GGA2 | 0.753158 | 3 | 0 | 3 |
| TTC30B | FBXO21 | 0.747819 | 4 | 0 | 4 |
| TTC30B | FBXO7 | 0.744641 | 4 | 0 | 4 |
| TTC30B | NF1 | 0.741733 | 3 | 0 | 3 |
| TTC30B | CEP350 | 0.733924 | 3 | 0 | 3 |
| TTC30B | TMX1 | 0.729833 | 3 | 0 | 3 |
| TTC30B | NCAPG | 0.727409 | 3 | 0 | 3 |
| TTC30B | RNASET2 | 0.727381 | 3 | 0 | 3 |
| TTC30B | STARD10 | 0.726624 | 3 | 0 | 3 |
| TTC30B | ANAPC1 | 0.725703 | 3 | 0 | 3 |
| TTC30B | EIF2AK4 | 0.725274 | 4 | 0 | 3 |
| TTC30B | DDX21 | 0.724195 | 3 | 0 | 3 |
| TTC30B | ASB9 | 0.723733 | 3 | 0 | 3 |
For details and further investigation, click here
