| Full name: ubiquitin specific peptidase 29 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19q13.43 | ||
| Entrez ID: 57663 | HGNC ID: HGNC:18563 | Ensembl Gene: ENSG00000131864 | OMIM ID: 609546 |
| Drug and gene relationship at DGIdb | |||
Expression of USP29:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | USP29 | 57663 | 220895_at | -0.0596 | 0.8646 | |
| GSE20347 | USP29 | 57663 | 220895_at | 0.0520 | 0.5368 | |
| GSE23400 | USP29 | 57663 | 220895_at | -0.1328 | 0.0221 | |
| GSE26886 | USP29 | 57663 | 220895_at | 0.0154 | 0.9160 | |
| GSE29001 | USP29 | 57663 | 220895_at | -0.1708 | 0.3881 | |
| GSE38129 | USP29 | 57663 | 220895_at | -0.0447 | 0.5598 | |
| GSE45670 | USP29 | 57663 | 220895_at | 0.0402 | 0.6117 | |
| GSE53622 | USP29 | 57663 | 135665 | -0.2037 | 0.0537 | |
| GSE53624 | USP29 | 57663 | 135665 | -0.1952 | 0.1334 | |
| GSE63941 | USP29 | 57663 | 220895_at | 0.0612 | 0.6230 | |
| GSE77861 | USP29 | 57663 | 220895_at | -0.0682 | 0.5857 | |
| TCGA | USP29 | 57663 | RNAseq | 1.7255 | 0.3474 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by USP29 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of USP29:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | USP29 | 57663 | 2 | 4 | 24 | |
| GSE20123 | USP29 | 57663 | 2 | 3 | 25 | |
| GSE43470 | USP29 | 57663 | 2 | 9 | 32 | |
| GSE46452 | USP29 | 57663 | 45 | 1 | 13 | |
| GSE47630 | USP29 | 57663 | 8 | 6 | 26 | |
| GSE54993 | USP29 | 57663 | 18 | 4 | 48 | |
| GSE54994 | USP29 | 57663 | 5 | 12 | 36 | |
| GSE60625 | USP29 | 57663 | 9 | 0 | 2 | |
| GSE74703 | USP29 | 57663 | 2 | 6 | 28 | |
| GSE74704 | USP29 | 57663 | 2 | 1 | 17 | |
| TCGA | USP29 | 57663 | 20 | 15 | 61 |
Total number of gains: 115; Total number of losses: 61; Total Number of normals: 312.
Somatic mutations of USP29:
Generating mutation plots.
Highly correlated genes for USP29:
Showing top 20/573 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| USP29 | PRAMEF12 | 0.732933 | 4 | 0 | 4 |
| USP29 | CHRM2 | 0.724595 | 5 | 0 | 5 |
| USP29 | DRD5 | 0.717568 | 4 | 0 | 4 |
| USP29 | GRM1 | 0.713324 | 3 | 0 | 3 |
| USP29 | EPX | 0.706186 | 4 | 0 | 4 |
| USP29 | EPOR | 0.698848 | 4 | 0 | 4 |
| USP29 | NTNG1 | 0.696171 | 4 | 0 | 4 |
| USP29 | ATG10 | 0.694362 | 4 | 0 | 4 |
| USP29 | CYSLTR2 | 0.693521 | 4 | 0 | 4 |
| USP29 | S100G | 0.691525 | 3 | 0 | 3 |
| USP29 | GPR52 | 0.690317 | 3 | 0 | 3 |
| USP29 | SLC17A3 | 0.68874 | 3 | 0 | 3 |
| USP29 | KCNH6 | 0.682327 | 4 | 0 | 3 |
| USP29 | HHLA1 | 0.680764 | 5 | 0 | 5 |
| USP29 | KIR2DS5 | 0.680072 | 4 | 0 | 4 |
| USP29 | MUC5AC | 0.676849 | 4 | 0 | 4 |
| USP29 | OR10J1 | 0.671424 | 4 | 0 | 3 |
| USP29 | ZMAT4 | 0.670435 | 4 | 0 | 3 |
| USP29 | MASP2 | 0.670428 | 3 | 0 | 3 |
| USP29 | AMHR2 | 0.669568 | 5 | 0 | 5 |
For details and further investigation, click here
