| Full name: VHL binding protein 1 | Alias Symbol: PFD3|PFDN3 | ||
| Type: protein-coding gene | Cytoband: Xq28 | ||
| Entrez ID: 7411 | HGNC ID: HGNC:12662 | Ensembl Gene: ENSG00000155959 | OMIM ID: 300133 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of VBP1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VBP1 | 7411 | 201472_at | -0.1661 | 0.4497 | |
| GSE20347 | VBP1 | 7411 | 201472_at | 0.4889 | 0.0766 | |
| GSE23400 | VBP1 | 7411 | 201472_at | 0.6099 | 0.0000 | |
| GSE26886 | VBP1 | 7411 | 201472_at | 0.6490 | 0.0000 | |
| GSE29001 | VBP1 | 7411 | 201472_at | 0.3252 | 0.4972 | |
| GSE38129 | VBP1 | 7411 | 201472_at | 0.5094 | 0.0016 | |
| GSE45670 | VBP1 | 7411 | 201472_at | 0.3580 | 0.0195 | |
| GSE53622 | VBP1 | 7411 | 69117 | 0.7060 | 0.0000 | |
| GSE53624 | VBP1 | 7411 | 69117 | 0.6343 | 0.0000 | |
| GSE63941 | VBP1 | 7411 | 201472_at | 0.5785 | 0.0386 | |
| GSE77861 | VBP1 | 7411 | 201472_at | 0.4386 | 0.0182 | |
| GSE97050 | VBP1 | 7411 | A_23_P256223 | 0.4435 | 0.1596 | |
| SRP007169 | VBP1 | 7411 | RNAseq | 0.3498 | 0.3892 | |
| SRP008496 | VBP1 | 7411 | RNAseq | 0.4211 | 0.0716 | |
| SRP064894 | VBP1 | 7411 | RNAseq | 0.3892 | 0.0256 | |
| SRP133303 | VBP1 | 7411 | RNAseq | 1.0838 | 0.0000 | |
| SRP159526 | VBP1 | 7411 | RNAseq | 0.3470 | 0.1966 | |
| SRP193095 | VBP1 | 7411 | RNAseq | 0.2447 | 0.2198 | |
| SRP219564 | VBP1 | 7411 | RNAseq | 0.3303 | 0.3462 | |
| TCGA | VBP1 | 7411 | RNAseq | 0.2486 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by VBP1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of VBP1:
No record found for this gene.
Somatic mutations of VBP1:
Generating mutation plots.
Highly correlated genes for VBP1:
Showing top 20/930 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VBP1 | CD44 | 0.836888 | 3 | 0 | 3 |
| VBP1 | FOXJ2 | 0.795695 | 3 | 0 | 3 |
| VBP1 | SGTB | 0.766606 | 3 | 0 | 3 |
| VBP1 | LRRCC1 | 0.742214 | 3 | 0 | 3 |
| VBP1 | PTPMT1 | 0.741329 | 4 | 0 | 4 |
| VBP1 | TMTC1 | 0.72691 | 4 | 0 | 4 |
| VBP1 | NUB1 | 0.71652 | 3 | 0 | 3 |
| VBP1 | PYCR2 | 0.711927 | 3 | 0 | 3 |
| VBP1 | ANAPC1 | 0.71107 | 3 | 0 | 3 |
| VBP1 | CD93 | 0.710735 | 4 | 0 | 3 |
| VBP1 | NAPG | 0.710388 | 3 | 0 | 3 |
| VBP1 | MMS22L | 0.705093 | 3 | 0 | 3 |
| VBP1 | DNMBP | 0.704765 | 3 | 0 | 3 |
| VBP1 | SRFBP1 | 0.703517 | 3 | 0 | 3 |
| VBP1 | CDC42SE2 | 0.703429 | 5 | 0 | 4 |
| VBP1 | HPS3 | 0.702586 | 4 | 0 | 4 |
| VBP1 | RAB34 | 0.702081 | 3 | 0 | 3 |
| VBP1 | IKBIP | 0.701355 | 5 | 0 | 5 |
| VBP1 | FUNDC2 | 0.701303 | 6 | 0 | 6 |
| VBP1 | SCAI | 0.696883 | 3 | 0 | 3 |
For details and further investigation, click here
