SCAI

 

Full name: suppressor of cancer cell invasion Alias Symbol: FLJ36664|NET40
Type: protein-coding gene Cytoband: 9q33.3
Entrez ID: 286205 HGNC ID: HGNC:26709 Ensembl Gene: ENSG00000173611 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of SCAI:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SCAI 286205 228174_at 0.0849 0.9319
GSE20347 SCAI 286205 214997_at 0.0011 0.9942
GSE23400 SCAI 286205 214997_at 0.0747 0.0936
GSE26886 SCAI 286205 228174_at 1.0313 0.0037
GSE29001 SCAI 286205 214997_at 0.1197 0.6935
GSE38129 SCAI 286205 214997_at -0.0054 0.9703
GSE45670 SCAI 286205 228174_at -0.2395 0.3542
GSE53622 SCAI 286205 29893 0.0652 0.6145
GSE53624 SCAI 286205 87067 -0.0630 0.5569
GSE63941 SCAI 286205 228174_at 0.0527 0.9437
GSE77861 SCAI 286205 228174_at 0.1962 0.3902
GSE97050 SCAI 286205 A_23_P325625 -0.2682 0.4033
SRP007169 SCAI 286205 RNAseq 0.6270 0.1363
SRP008496 SCAI 286205 RNAseq 0.5180 0.0343
SRP064894 SCAI 286205 RNAseq 0.2453 0.1942
SRP133303 SCAI 286205 RNAseq 0.0857 0.5374
SRP159526 SCAI 286205 RNAseq 0.3771 0.3228
SRP193095 SCAI 286205 RNAseq 0.0447 0.6658
SRP219564 SCAI 286205 RNAseq -0.1889 0.6024
TCGA SCAI 286205 RNAseq -0.0509 0.4965

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by SCAI expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SCAI:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SCAI 286205 4 8 18
GSE20123 SCAI 286205 4 8 18
GSE43470 SCAI 286205 6 4 33
GSE46452 SCAI 286205 6 13 40
GSE47630 SCAI 286205 3 16 21
GSE54993 SCAI 286205 3 3 64
GSE54994 SCAI 286205 12 8 33
GSE60625 SCAI 286205 0 0 11
GSE74703 SCAI 286205 5 3 28
GSE74704 SCAI 286205 2 6 12
TCGA SCAI 286205 27 25 44

Total number of gains: 72; Total number of losses: 94; Total Number of normals: 322.  


 

Somatic mutations of SCAI:

 

Generating mutation plots.

 

Highly correlated genes for SCAI:

 

Showing top 20/540 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SCAIGOLPH30.812148303
SCAIRICTOR0.806472303
SCAIBOD10.793109303
SCAIARL5B0.756262303
SCAIFAR20.754315403
SCAIPOLI0.750058303
SCAILRRC580.748029303
SCAIKCNMB40.727422403
SCAIGMPR0.726169303
SCAIGPR1580.725397303
SCAIMTO10.721586303
SCAIINTU0.71788303
SCAINBN0.716781403
SCAICOA50.713779403
SCAIZSCAN210.711963403
SCAICPNE80.711055303
SCAIAPPBP20.708672303
SCAIGNA130.701984404
SCAICDC42SE20.699763303
SCAIMRPL240.698514404

For details and further investigation, click here