| Full name: V-set and transmembrane domain containing 4 | Alias Symbol: FLJ31737 | ||
| Type: protein-coding gene | Cytoband: 10q11.23 | ||
| Entrez ID: 196740 | HGNC ID: HGNC:26470 | Ensembl Gene: ENSG00000165633 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of VSTM4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VSTM4 | 196740 | 213381_at | -0.3341 | 0.5696 | |
| GSE20347 | VSTM4 | 196740 | 213381_at | -0.0504 | 0.6321 | |
| GSE23400 | VSTM4 | 196740 | 213381_at | -0.1111 | 0.0285 | |
| GSE26886 | VSTM4 | 196740 | 213381_at | 0.5343 | 0.0104 | |
| GSE29001 | VSTM4 | 196740 | 213381_at | 0.0888 | 0.7462 | |
| GSE38129 | VSTM4 | 196740 | 213381_at | -0.2761 | 0.0916 | |
| GSE45670 | VSTM4 | 196740 | 213381_at | -0.6562 | 0.0000 | |
| GSE53622 | VSTM4 | 196740 | 43071 | -0.0692 | 0.6875 | |
| GSE53624 | VSTM4 | 196740 | 43071 | 0.0864 | 0.6107 | |
| GSE63941 | VSTM4 | 196740 | 244057_s_at | -1.1234 | 0.0002 | |
| GSE77861 | VSTM4 | 196740 | 244057_s_at | 0.0067 | 0.9744 | |
| GSE97050 | VSTM4 | A_19_P00811460 | -0.3110 | 0.3261 | ||
| SRP007169 | VSTM4 | 196740 | RNAseq | 1.3288 | 0.0142 | |
| SRP064894 | VSTM4 | 196740 | RNAseq | 0.0551 | 0.8453 | |
| SRP133303 | VSTM4 | 196740 | RNAseq | -0.1311 | 0.5757 | |
| SRP159526 | VSTM4 | 196740 | RNAseq | -0.7371 | 0.0028 | |
| SRP193095 | VSTM4 | 196740 | RNAseq | 0.9139 | 0.0000 | |
| SRP219564 | VSTM4 | 196740 | RNAseq | -0.0912 | 0.8769 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by VSTM4 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of VSTM4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VSTM4 | 196740 | 2 | 5 | 23 | |
| GSE20123 | VSTM4 | 196740 | 2 | 5 | 23 | |
| GSE43470 | VSTM4 | 196740 | 2 | 6 | 35 | |
| GSE46452 | VSTM4 | 196740 | 0 | 13 | 46 | |
| GSE47630 | VSTM4 | 196740 | 4 | 12 | 24 | |
| GSE54993 | VSTM4 | 196740 | 9 | 0 | 61 | |
| GSE54994 | VSTM4 | 196740 | 2 | 10 | 41 | |
| GSE60625 | VSTM4 | 196740 | 0 | 0 | 11 | |
| GSE74703 | VSTM4 | 196740 | 2 | 3 | 31 | |
| GSE74704 | VSTM4 | 196740 | 1 | 4 | 15 | |
| TCGA | VSTM4 | 196740 | 12 | 22 | 62 |
Total number of gains: 36; Total number of losses: 80; Total Number of normals: 372.
Somatic mutations of VSTM4:
Generating mutation plots.
Highly correlated genes for VSTM4:
Showing top 20/1193 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VSTM4 | AFF3 | 0.829375 | 3 | 0 | 3 |
| VSTM4 | DEXI | 0.810484 | 3 | 0 | 3 |
| VSTM4 | FIBIN | 0.777297 | 5 | 0 | 4 |
| VSTM4 | DIAPH2 | 0.775977 | 3 | 0 | 3 |
| VSTM4 | CNRIP1 | 0.774589 | 7 | 0 | 7 |
| VSTM4 | ZNF579 | 0.770562 | 3 | 0 | 3 |
| VSTM4 | RAB7B | 0.770019 | 3 | 0 | 3 |
| VSTM4 | LINC01279 | 0.769814 | 4 | 0 | 4 |
| VSTM4 | A1BG | 0.769583 | 3 | 0 | 3 |
| VSTM4 | ELFN1 | 0.757677 | 3 | 0 | 3 |
| VSTM4 | C11orf96 | 0.754787 | 5 | 0 | 5 |
| VSTM4 | TEAD2 | 0.750708 | 3 | 0 | 3 |
| VSTM4 | FBLN5 | 0.743479 | 10 | 0 | 10 |
| VSTM4 | CYGB | 0.741981 | 3 | 0 | 3 |
| VSTM4 | SGMS2 | 0.741892 | 3 | 0 | 3 |
| VSTM4 | S1PR1 | 0.741657 | 6 | 0 | 5 |
| VSTM4 | ANXA6 | 0.741092 | 10 | 0 | 10 |
| VSTM4 | MSRB3 | 0.739531 | 6 | 0 | 5 |
| VSTM4 | GIMAP1 | 0.738083 | 4 | 0 | 4 |
| VSTM4 | C20orf194 | 0.737083 | 3 | 0 | 3 |
For details and further investigation, click here
