GIMAP1

 

Full name: GTPase, IMAP family member 1 Alias Symbol: HIMAP1|IMAP38|IMAP1|IAN2
Type: protein-coding gene Cytoband: 7q36.1
Entrez ID: 170575 HGNC ID: HGNC:23237 Ensembl Gene: ENSG00000213203 OMIM ID: 608084
Drug and gene relationship at DGIdb

 

Expression of GIMAP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GIMAP1 170575 1552315_at -0.0562 0.9269
GSE26886 GIMAP1 170575 1552315_at -0.3530 0.2232
GSE45670 GIMAP1 170575 1552315_at -0.5930 0.0106
GSE53622 GIMAP1 170575 62749 -0.8746 0.0000
GSE53624 GIMAP1 170575 62749 -0.6924 0.0000
GSE63941 GIMAP1 170575 1552315_at 0.0824 0.6844
GSE77861 GIMAP1 170575 1552315_at -0.0616 0.5638
GSE97050 GIMAP1 170575 A_23_P427023 -0.0871 0.8706
SRP064894 GIMAP1 170575 RNAseq 0.1190 0.7711
SRP133303 GIMAP1 170575 RNAseq -1.0132 0.0001
SRP159526 GIMAP1 170575 RNAseq -0.7515 0.1248
SRP193095 GIMAP1 170575 RNAseq -0.2797 0.1211
SRP219564 GIMAP1 170575 RNAseq -0.0503 0.9188
TCGA GIMAP1 170575 RNAseq -0.5895 0.0031

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by GIMAP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GIMAP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GIMAP1 170575 2 4 24
GSE20123 GIMAP1 170575 2 4 24
GSE43470 GIMAP1 170575 2 5 36
GSE46452 GIMAP1 170575 7 2 50
GSE47630 GIMAP1 170575 5 9 26
GSE54993 GIMAP1 170575 3 3 64
GSE54994 GIMAP1 170575 5 8 40
GSE60625 GIMAP1 170575 0 0 11
GSE74703 GIMAP1 170575 2 4 30
GSE74704 GIMAP1 170575 1 4 15
TCGA GIMAP1 170575 25 26 45

Total number of gains: 54; Total number of losses: 69; Total Number of normals: 365.  


 

Somatic mutations of GIMAP1:

 

Generating mutation plots.

 

Highly correlated genes for GIMAP1:

 

Showing top 20/635 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GIMAP1GIMAP60.847107707
GIMAP1GIMAP50.818436403
GIMAP1FLI10.806892707
GIMAP1TNFSF80.793134404
GIMAP1PHACTR10.789618404
GIMAP1CTDSP20.789053303
GIMAP1MS4A6A0.785286707
GIMAP1PIP4K2A0.779378303
GIMAP1ARHGAP150.779264404
GIMAP1MPEG10.769274606
GIMAP1CD79B0.76754505
GIMAP1ST3GAL50.766975303
GIMAP1RCSD10.76456707
GIMAP1GAB30.763307605
GIMAP1RAB39B0.762377404
GIMAP1TFPI0.757732505
GIMAP1IRF80.752674707
GIMAP1PDE7B0.749603505
GIMAP1TNFSF120.747653404
GIMAP1RBP50.742411303

For details and further investigation, click here