IFT122

 

Full name: intraflagellar transport 122 Alias Symbol: WDR140|WDR10p|SPG
Type: protein-coding gene Cytoband: 3q21.3-q22.1
Entrez ID: 55764 HGNC ID: HGNC:13556 Ensembl Gene: ENSG00000163913 OMIM ID: 606045
Drug and gene relationship at DGIdb

 

Expression of IFT122:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 IFT122 55764 220744_s_at 0.6950 0.1535
GSE20347 IFT122 55764 216678_at 0.0531 0.6692
GSE23400 IFT122 55764 216678_at -0.1478 0.0006
GSE26886 IFT122 55764 220744_s_at 0.4884 0.0649
GSE29001 IFT122 55764 216678_at -0.2879 0.1136
GSE38129 IFT122 55764 220744_s_at 0.4237 0.0048
GSE45670 IFT122 55764 220744_s_at 0.0698 0.7077
GSE53622 IFT122 55764 54091 0.4475 0.0000
GSE53624 IFT122 55764 54091 0.6004 0.0000
GSE63941 IFT122 55764 220744_s_at 0.1416 0.7567
GSE77861 IFT122 55764 216678_at -0.0525 0.6079
GSE97050 IFT122 55764 A_23_P212447 0.2629 0.2561
SRP007169 IFT122 55764 RNAseq 1.7356 0.0035
SRP008496 IFT122 55764 RNAseq 1.8102 0.0000
SRP064894 IFT122 55764 RNAseq 0.7119 0.0002
SRP133303 IFT122 55764 RNAseq 0.1008 0.4977
SRP159526 IFT122 55764 RNAseq 0.8203 0.0588
SRP193095 IFT122 55764 RNAseq 0.4391 0.0006
SRP219564 IFT122 55764 RNAseq 0.5628 0.0513
TCGA IFT122 55764 RNAseq -0.0386 0.5327

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by IFT122 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of IFT122:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 IFT122 55764 17 0 13
GSE20123 IFT122 55764 17 0 13
GSE43470 IFT122 55764 19 0 24
GSE46452 IFT122 55764 14 5 40
GSE47630 IFT122 55764 18 3 19
GSE54993 IFT122 55764 2 8 60
GSE54994 IFT122 55764 32 3 18
GSE60625 IFT122 55764 0 6 5
GSE74703 IFT122 55764 17 0 19
GSE74704 IFT122 55764 13 0 7
TCGA IFT122 55764 58 5 33

Total number of gains: 207; Total number of losses: 30; Total Number of normals: 251.  


 

Somatic mutations of IFT122:

 

Generating mutation plots.

 

Highly correlated genes for IFT122:

 

Showing top 20/359 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
IFT122GNG30.726697404
IFT122AATK0.722745303
IFT122SERPINA40.721662404
IFT122ZMAT40.718747504
IFT122NAT20.717632303
IFT122TSHR0.716052404
IFT122SLC17A70.715997303
IFT122CYP19A10.713252303
IFT122CNTD20.709501404
IFT122CYP11B10.708856303
IFT122REG3A0.708618403
IFT122TTR0.703173404
IFT122CNTN20.701613404
IFT122CA80.698787303
IFT122TGM40.695128404
IFT122ARHGEF380.694194403
IFT122KCNA10.693797404
IFT122OR2J20.692881303
IFT122CRP0.690116404
IFT122CACNG10.688461303

For details and further investigation, click here