WNT2B

 

Full name: Wnt family member 2B Alias Symbol: XWNT2
Type: protein-coding gene Cytoband: 1p13.2
Entrez ID: 7482 HGNC ID: HGNC:12781 Ensembl Gene: ENSG00000134245 OMIM ID: 601968
Drug and gene relationship at DGIdb

 

WNT2B involved pathways:

KEGG pathway Description View
hsa04150mTOR signaling pathway
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04916Melanogenesis
hsa05166HTLV-I infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05217Basal cell carcinoma

 

Expression of WNT2B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WNT2B 7482 238512_at -0.7065 0.6375
GSE20347 WNT2B 7482 206459_s_at 0.0291 0.7628
GSE23400 WNT2B 7482 206459_s_at 0.0119 0.8039
GSE26886 WNT2B 7482 238512_at -0.5709 0.4030
GSE29001 WNT2B 7482 206458_s_at 0.2972 0.3472
GSE38129 WNT2B 7482 206458_s_at 0.0653 0.8123
GSE45670 WNT2B 7482 238512_at -0.9534 0.0756
GSE53622 WNT2B 7482 28078 -0.6953 0.0002
GSE53624 WNT2B 7482 28078 -0.2298 0.0392
GSE63941 WNT2B 7482 238512_at -3.4712 0.0008
GSE77861 WNT2B 7482 238512_at 0.1806 0.6837
GSE97050 WNT2B 7482 A_23_P138352 -0.4287 0.3462
SRP007169 WNT2B 7482 RNAseq 0.7188 0.1446
SRP008496 WNT2B 7482 RNAseq 0.7684 0.1198
SRP064894 WNT2B 7482 RNAseq -0.4099 0.1455
SRP133303 WNT2B 7482 RNAseq -0.2562 0.2547
SRP159526 WNT2B 7482 RNAseq 0.2153 0.7047
SRP193095 WNT2B 7482 RNAseq -0.2232 0.3044
SRP219564 WNT2B 7482 RNAseq -0.8975 0.0171
TCGA WNT2B 7482 RNAseq 0.0787 0.7015

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by WNT2B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WNT2B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WNT2B 7482 0 10 20
GSE20123 WNT2B 7482 0 10 20
GSE43470 WNT2B 7482 0 8 35
GSE46452 WNT2B 7482 2 1 56
GSE47630 WNT2B 7482 9 5 26
GSE54993 WNT2B 7482 0 1 69
GSE54994 WNT2B 7482 7 4 42
GSE60625 WNT2B 7482 0 0 11
GSE74703 WNT2B 7482 0 7 29
GSE74704 WNT2B 7482 0 6 14
TCGA WNT2B 7482 7 28 61

Total number of gains: 25; Total number of losses: 80; Total Number of normals: 383.  


 

Somatic mutations of WNT2B:

 

Generating mutation plots.

 

Highly correlated genes for WNT2B:

 

Showing top 20/24 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WNT2BSLC4A70.715943303
WNT2BMID10.704495303
WNT2BZC3H60.689721303
WNT2BBRAF0.679244403
WNT2BZNF6300.668637303
WNT2BFASTK0.665515303
WNT2BTNNI3K0.647987303
WNT2BSMR3A0.637038303
WNT2BCUTC0.619105303
WNT2BHEBP10.612256503
WNT2BZNF7630.609196404
WNT2BCYB561D10.605773403
WNT2BZNF6820.599916403
WNT2BCD90.597048503
WNT2BTRAPPC6A0.586028404
WNT2BCACNB30.579833303
WNT2BKDM7A0.567256303
WNT2BCLDN230.562718303
WNT2BPTCH10.545534603
WNT2BVAMP40.528878603

For details and further investigation, click here