| Full name: CD9 molecule | Alias Symbol: BA2|P24|TSPAN29|MRP-1 | ||
| Type: protein-coding gene | Cytoband: 12p13.31 | ||
| Entrez ID: 928 | HGNC ID: HGNC:1709 | Ensembl Gene: ENSG00000010278 | OMIM ID: 143030 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of CD9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CD9 | 928 | 201005_at | -0.2277 | 0.7483 | |
| GSE20347 | CD9 | 928 | 201005_at | -0.1758 | 0.4035 | |
| GSE23400 | CD9 | 928 | 201005_at | -0.0581 | 0.5673 | |
| GSE26886 | CD9 | 928 | 201005_at | -1.3193 | 0.0010 | |
| GSE29001 | CD9 | 928 | 201005_at | -0.2367 | 0.6372 | |
| GSE38129 | CD9 | 928 | 201005_at | 0.1167 | 0.5719 | |
| GSE45670 | CD9 | 928 | 201005_at | 0.0655 | 0.7443 | |
| GSE53622 | CD9 | 928 | 130210 | -0.3155 | 0.0029 | |
| GSE53624 | CD9 | 928 | 130210 | -0.3903 | 0.0000 | |
| GSE63941 | CD9 | 928 | 201005_at | 0.5367 | 0.3064 | |
| GSE77861 | CD9 | 928 | 201005_at | 0.3311 | 0.2701 | |
| GSE97050 | CD9 | 928 | A_23_P76364 | -0.3340 | 0.3038 | |
| SRP007169 | CD9 | 928 | RNAseq | -0.2147 | 0.5978 | |
| SRP008496 | CD9 | 928 | RNAseq | -0.0306 | 0.9180 | |
| SRP064894 | CD9 | 928 | RNAseq | -0.7253 | 0.0066 | |
| SRP133303 | CD9 | 928 | RNAseq | -0.0877 | 0.7285 | |
| SRP159526 | CD9 | 928 | RNAseq | 0.0525 | 0.9130 | |
| SRP193095 | CD9 | 928 | RNAseq | -0.4758 | 0.0816 | |
| SRP219564 | CD9 | 928 | RNAseq | -1.0055 | 0.0346 | |
| TCGA | CD9 | 928 | RNAseq | 0.3543 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by CD9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CD9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CD9 | 928 | 9 | 3 | 18 | |
| GSE20123 | CD9 | 928 | 9 | 3 | 18 | |
| GSE43470 | CD9 | 928 | 8 | 3 | 32 | |
| GSE46452 | CD9 | 928 | 10 | 1 | 48 | |
| GSE47630 | CD9 | 928 | 12 | 2 | 26 | |
| GSE54993 | CD9 | 928 | 1 | 10 | 59 | |
| GSE54994 | CD9 | 928 | 10 | 2 | 41 | |
| GSE60625 | CD9 | 928 | 0 | 1 | 10 | |
| GSE74703 | CD9 | 928 | 7 | 2 | 27 | |
| GSE74704 | CD9 | 928 | 5 | 2 | 13 | |
| TCGA | CD9 | 928 | 40 | 6 | 50 |
Total number of gains: 111; Total number of losses: 35; Total Number of normals: 342.
Somatic mutations of CD9:
Generating mutation plots.
Highly correlated genes for CD9:
Showing top 20/98 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CD9 | ADAMTS17 | 0.692992 | 3 | 0 | 3 |
| CD9 | LETMD1 | 0.682541 | 3 | 0 | 3 |
| CD9 | CSDE1 | 0.665703 | 3 | 0 | 3 |
| CD9 | SLC25A3 | 0.664885 | 5 | 0 | 4 |
| CD9 | PNPLA4 | 0.651715 | 3 | 0 | 3 |
| CD9 | SPATA6 | 0.651352 | 3 | 0 | 3 |
| CD9 | FIS1 | 0.640587 | 4 | 0 | 3 |
| CD9 | KRAS | 0.636755 | 7 | 0 | 6 |
| CD9 | SOSTDC1 | 0.634377 | 3 | 0 | 3 |
| CD9 | SNX1 | 0.60737 | 4 | 0 | 3 |
| CD9 | SLC25A4 | 0.603599 | 5 | 0 | 4 |
| CD9 | VPS25 | 0.602892 | 5 | 0 | 4 |
| CD9 | NTS | 0.600578 | 4 | 0 | 3 |
| CD9 | SOX2 | 0.599941 | 10 | 0 | 6 |
| CD9 | MAL2 | 0.597623 | 4 | 0 | 3 |
| CD9 | WNT2B | 0.597048 | 5 | 0 | 3 |
| CD9 | FRAT2 | 0.593424 | 9 | 0 | 7 |
| CD9 | SOX21-AS1 | 0.591663 | 5 | 0 | 4 |
| CD9 | ARF5 | 0.586715 | 6 | 0 | 5 |
| CD9 | SMIM7 | 0.585601 | 4 | 0 | 3 |
For details and further investigation, click here
