KDM7A

 

Full name: lysine demethylase 7A Alias Symbol: KIAA1718
Type: protein-coding gene Cytoband: 7q34
Entrez ID: 80853 HGNC ID: HGNC:22224 Ensembl Gene: ENSG00000006459 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of KDM7A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KDM7A 80853 221778_at 0.0233 0.9830
GSE20347 KDM7A 80853 221778_at -0.2517 0.2305
GSE23400 KDM7A 80853 221778_at -0.0774 0.4369
GSE26886 KDM7A 80853 221778_at -1.6672 0.0001
GSE29001 KDM7A 80853 221778_at -0.3388 0.2969
GSE38129 KDM7A 80853 221778_at -0.0973 0.5781
GSE45670 KDM7A 80853 221778_at 0.0630 0.7786
GSE53622 KDM7A 80853 2684 -0.0533 0.6441
GSE53624 KDM7A 80853 113639 -0.4421 0.0000
GSE63941 KDM7A 80853 221778_at -1.9287 0.0047
GSE77861 KDM7A 80853 221778_at 0.8197 0.0152
SRP007169 KDM7A 80853 RNAseq 0.4566 0.2064
SRP008496 KDM7A 80853 RNAseq 0.2768 0.3134
SRP064894 KDM7A 80853 RNAseq -0.3191 0.3692
SRP133303 KDM7A 80853 RNAseq -0.0135 0.9530
SRP159526 KDM7A 80853 RNAseq -0.7420 0.1860
SRP193095 KDM7A 80853 RNAseq -0.1813 0.1398
SRP219564 KDM7A 80853 RNAseq -1.1814 0.0265

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by KDM7A expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of KDM7A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KDM7A 80853 5 2 23
GSE20123 KDM7A 80853 5 2 23
GSE43470 KDM7A 80853 2 4 37
GSE46452 KDM7A 80853 7 2 50
GSE47630 KDM7A 80853 7 4 29
GSE54993 KDM7A 80853 3 5 62
GSE54994 KDM7A 80853 5 8 40
GSE60625 KDM7A 80853 0 0 11
GSE74703 KDM7A 80853 2 4 30
GSE74704 KDM7A 80853 1 2 17

Total number of gains: 37; Total number of losses: 33; Total Number of normals: 322.  


 

Somatic mutations of KDM7A:

 

Generating mutation plots.

 

Highly correlated genes for KDM7A:

 

Showing top 20/52 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KDM7ALMTK20.738234303
KDM7AEXOC40.69522303
KDM7ASLC37A30.678873404
KDM7APRPF390.641497303
KDM7AZC3HAV1L0.60549403
KDM7ASHOC20.601408503
KDM7AZNF2170.594194605
KDM7AUBE2H0.592492605
KDM7AUBE3A0.592127303
KDM7ATMEM87B0.588301404
KDM7ATRIP120.587907303
KDM7ACCDC1170.587567303
KDM7ACMTR20.585488303
KDM7ADTWD10.585196303
KDM7AILKAP0.583816303
KDM7ATMEM2090.582808303
KDM7ASLC35B40.582467403
KDM7AAGK0.582063403
KDM7AARF50.581852503
KDM7AMKRN10.581656604

For details and further investigation, click here