WNT9A

 

Full name: Wnt family member 9A Alias Symbol: 
Type: protein-coding gene Cytoband: 1q42.13
Entrez ID: 7483 HGNC ID: HGNC:12778 Ensembl Gene: ENSG00000143816 OMIM ID: 602863
Drug and gene relationship at DGIdb

 

WNT9A involved pathways:

KEGG pathway Description View
hsa04150mTOR signaling pathway
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04916Melanogenesis
hsa05166HTLV-I infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05217Basal cell carcinoma

 

Expression of WNT9A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WNT9A 7483 230643_at 0.1038 0.8162
GSE26886 WNT9A 7483 230643_at 0.4089 0.0027
GSE45670 WNT9A 7483 230643_at 0.1733 0.2696
GSE53622 WNT9A 7483 108902 0.0379 0.7872
GSE53624 WNT9A 7483 108902 0.3741 0.0001
GSE63941 WNT9A 7483 230643_at 1.0804 0.1089
GSE77861 WNT9A 7483 230643_at 0.0223 0.9302
GSE97050 WNT9A 7483 A_33_P3384058 0.1078 0.6250
SRP007169 WNT9A 7483 RNAseq 1.1083 0.1926
SRP064894 WNT9A 7483 RNAseq 0.3840 0.3036
SRP133303 WNT9A 7483 RNAseq 0.6722 0.0236
SRP159526 WNT9A 7483 RNAseq 0.2109 0.7617
SRP219564 WNT9A 7483 RNAseq -1.2268 0.1881
TCGA WNT9A 7483 RNAseq 0.2359 0.2950

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by WNT9A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WNT9A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WNT9A 7483 11 0 19
GSE20123 WNT9A 7483 11 0 19
GSE43470 WNT9A 7483 7 1 35
GSE46452 WNT9A 7483 3 1 55
GSE47630 WNT9A 7483 15 0 25
GSE54993 WNT9A 7483 0 6 64
GSE54994 WNT9A 7483 17 0 36
GSE60625 WNT9A 7483 0 0 11
GSE74703 WNT9A 7483 7 1 28
GSE74704 WNT9A 7483 5 0 15
TCGA WNT9A 7483 45 2 49

Total number of gains: 121; Total number of losses: 11; Total Number of normals: 356.  


 

Somatic mutations of WNT9A:

 

Generating mutation plots.

 

Highly correlated genes for WNT9A:

 

Showing top 20/178 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WNT9ADUSP150.803731303
WNT9AEVX10.779261303
WNT9AORM10.777752303
WNT9ASTK32C0.771504303
WNT9AGPR1500.766493303
WNT9ANPAS10.760954303
WNT9AZNF5240.75776303
WNT9AADRA2C0.756995303
WNT9AACTL6B0.755329303
WNT9ACABP40.755238303
WNT9AFUT70.742963303
WNT9AMIIP0.733461303
WNT9ANXPH30.731994303
WNT9ASV2C0.727282303
WNT9ACCDC28B0.724982303
WNT9AMGAT5B0.723768303
WNT9ABEST30.722379303
WNT9AADAMTS70.721157303
WNT9AC19orf810.716264303
WNT9ANEFH0.715751303

For details and further investigation, click here