YIF1A

 

Full name: Yip1 interacting factor homolog A, membrane trafficking protein Alias Symbol: YIF1P|54TM|FinGER7
Type: protein-coding gene Cytoband: 11q13.2
Entrez ID: 10897 HGNC ID: HGNC:16688 Ensembl Gene: ENSG00000174851 OMIM ID: 611484
Drug and gene relationship at DGIdb

 

Expression of YIF1A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 YIF1A 10897 202418_at 0.5225 0.1384
GSE20347 YIF1A 10897 202418_at 0.3893 0.0482
GSE23400 YIF1A 10897 202418_at 0.5885 0.0000
GSE26886 YIF1A 10897 202418_at 0.1473 0.3603
GSE29001 YIF1A 10897 202418_at 0.1859 0.6267
GSE38129 YIF1A 10897 202418_at 0.5050 0.0003
GSE45670 YIF1A 10897 202418_at 0.5057 0.0032
GSE53622 YIF1A 10897 42648 0.8283 0.0000
GSE53624 YIF1A 10897 3465 0.7700 0.0000
GSE63941 YIF1A 10897 202418_at 0.4121 0.3534
GSE77861 YIF1A 10897 202418_at 0.6881 0.0075
GSE97050 YIF1A 10897 A_33_P3364379 0.9616 0.1338
SRP007169 YIF1A 10897 RNAseq 0.9253 0.0745
SRP008496 YIF1A 10897 RNAseq 1.3859 0.0003
SRP064894 YIF1A 10897 RNAseq 0.7610 0.0113
SRP133303 YIF1A 10897 RNAseq 0.9273 0.0000
SRP159526 YIF1A 10897 RNAseq 0.4113 0.1655
SRP193095 YIF1A 10897 RNAseq 0.1223 0.4786
SRP219564 YIF1A 10897 RNAseq 0.6759 0.1192
TCGA YIF1A 10897 RNAseq 0.0756 0.1772

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Survival by YIF1A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of YIF1A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 YIF1A 10897 9 4 17
GSE20123 YIF1A 10897 9 4 17
GSE43470 YIF1A 10897 6 1 36
GSE46452 YIF1A 10897 11 3 45
GSE47630 YIF1A 10897 8 5 27
GSE54993 YIF1A 10897 3 0 67
GSE54994 YIF1A 10897 8 5 40
GSE60625 YIF1A 10897 0 3 8
GSE74703 YIF1A 10897 4 0 32
GSE74704 YIF1A 10897 7 2 11
TCGA YIF1A 10897 25 6 65

Total number of gains: 90; Total number of losses: 33; Total Number of normals: 365.  

 

Somatic mutations of YIF1A:

 

Generating mutation plots.

 

Highly correlated genes for YIF1A:

 

Showing top 20/1954 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
YIF1AZBTB90.818703404
YIF1ACDCA20.8148404
YIF1AEBNA1BP20.807497303
YIF1AKTI120.774501303
YIF1ACIB10.773688303
YIF1AINTS100.762912303
YIF1ATRADD0.761275303
YIF1ATMEM179B0.760452303
YIF1AHHEX0.753016303
YIF1ABANF10.74908210010
YIF1ATRMT1120.74896711011
YIF1AZNF7640.748432303
YIF1ACLSPN0.736154606
YIF1AXPO60.735875605
YIF1AZNF4690.73546505
YIF1APKN30.732678303
YIF1ARALGAPB0.724398303
YIF1AERP290.724172404
YIF1AEME10.72125404
YIF1AZNF7070.721055303

For details and further investigation, click here