ZCCHC14

 

Full name: zinc finger CCHC-type containing 14 Alias Symbol: BDG29|MGC14139
Type: protein-coding gene Cytoband: 16q24.2
Entrez ID: 23174 HGNC ID: HGNC:24134 Ensembl Gene: ENSG00000140948 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ZCCHC14:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZCCHC14 23174 212655_at 0.3465 0.3227
GSE20347 ZCCHC14 23174 212655_at 0.5120 0.0005
GSE23400 ZCCHC14 23174 212655_at 0.5152 0.0000
GSE26886 ZCCHC14 23174 212655_at -0.1409 0.7244
GSE29001 ZCCHC14 23174 212655_at 0.3480 0.2552
GSE38129 ZCCHC14 23174 212655_at 0.3776 0.0051
GSE45670 ZCCHC14 23174 212655_at -0.1905 0.2186
GSE53622 ZCCHC14 23174 61160 0.3627 0.0000
GSE53624 ZCCHC14 23174 61160 0.4814 0.0000
GSE63941 ZCCHC14 23174 212655_at -1.1459 0.0118
GSE77861 ZCCHC14 23174 212655_at 0.3663 0.0780
GSE97050 ZCCHC14 23174 A_23_P100420 -0.3800 0.1791
SRP007169 ZCCHC14 23174 RNAseq 1.3561 0.0005
SRP008496 ZCCHC14 23174 RNAseq 1.5826 0.0000
SRP064894 ZCCHC14 23174 RNAseq 0.0801 0.7327
SRP133303 ZCCHC14 23174 RNAseq 0.6266 0.0085
SRP159526 ZCCHC14 23174 RNAseq 0.2988 0.3679
SRP193095 ZCCHC14 23174 RNAseq 0.2878 0.0017
SRP219564 ZCCHC14 23174 RNAseq 0.0354 0.8669
TCGA ZCCHC14 23174 RNAseq -0.0576 0.2239

Upregulated datasets: 2; Downregulated datasets: 1.  


 

Survival by ZCCHC14 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZCCHC14:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZCCHC14 23174 4 2 24
GSE20123 ZCCHC14 23174 4 2 24
GSE43470 ZCCHC14 23174 1 13 29
GSE46452 ZCCHC14 23174 38 1 20
GSE47630 ZCCHC14 23174 11 9 20
GSE54993 ZCCHC14 23174 3 4 63
GSE54994 ZCCHC14 23174 9 11 33
GSE60625 ZCCHC14 23174 4 0 7
GSE74703 ZCCHC14 23174 1 9 26
GSE74704 ZCCHC14 23174 3 2 15
TCGA ZCCHC14 23174 28 15 53

Total number of gains: 106; Total number of losses: 68; Total Number of normals: 314.  


 

Somatic mutations of ZCCHC14:

 

Generating mutation plots.

 

Highly correlated genes for ZCCHC14:

 

Showing top 20/657 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZCCHC14SLC7A6OS0.805314303
ZCCHC14KIAA05130.745473303
ZCCHC14RRM2B0.730157303
ZCCHC14SNX180.714449303
ZCCHC14MED170.711976303
ZCCHC14JMY0.707689303
ZCCHC14TEX100.704429303
ZCCHC14NDRG30.700379303
ZCCHC14VPS450.698322303
ZCCHC14TOR1A0.695875303
ZCCHC14DLD0.695213303
ZCCHC14ARL13B0.694675303
ZCCHC14ELMOD20.692106303
ZCCHC14ZZZ30.685764505
ZCCHC14MED260.681189303
ZCCHC14ACACA0.68023403
ZCCHC14RB1CC10.675308303
ZCCHC14ULK10.674268404
ZCCHC14SYNC0.673957303
ZCCHC14PAAF10.673072303

For details and further investigation, click here