ZFP36L2

 

Full name: ZFP36 ring finger protein like 2 Alias Symbol: ERF2|RNF162C|TIS11D
Type: protein-coding gene Cytoband: 2p21
Entrez ID: 678 HGNC ID: HGNC:1108 Ensembl Gene: ENSG00000152518 OMIM ID: 612053
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ZFP36L2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZFP36L2 678 201368_at -0.4331 0.2172
GSE20347 ZFP36L2 678 201368_at -0.5105 0.0193
GSE23400 ZFP36L2 678 201368_at -0.4418 0.0000
GSE26886 ZFP36L2 678 201368_at -0.9303 0.0028
GSE29001 ZFP36L2 678 201368_at -0.8940 0.0014
GSE38129 ZFP36L2 678 201368_at -0.6538 0.0001
GSE45670 ZFP36L2 678 201368_at -0.9151 0.0000
GSE53622 ZFP36L2 678 66766 -0.7353 0.0000
GSE53624 ZFP36L2 678 66766 -0.7734 0.0000
GSE63941 ZFP36L2 678 201368_at -1.6514 0.0694
GSE77861 ZFP36L2 678 201368_at -0.4411 0.0357
GSE97050 ZFP36L2 678 A_23_P101960 0.1612 0.5647
SRP007169 ZFP36L2 678 RNAseq -1.2244 0.0000
SRP008496 ZFP36L2 678 RNAseq -1.6492 0.0000
SRP064894 ZFP36L2 678 RNAseq -0.3377 0.1054
SRP133303 ZFP36L2 678 RNAseq -0.5392 0.0051
SRP159526 ZFP36L2 678 RNAseq -0.5468 0.0126
SRP193095 ZFP36L2 678 RNAseq -0.5657 0.0034
SRP219564 ZFP36L2 678 RNAseq 0.0179 0.9586
TCGA ZFP36L2 678 RNAseq -0.2134 0.0002

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by ZFP36L2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZFP36L2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZFP36L2 678 12 2 16
GSE20123 ZFP36L2 678 11 2 17
GSE43470 ZFP36L2 678 3 1 39
GSE46452 ZFP36L2 678 1 4 54
GSE47630 ZFP36L2 678 7 0 33
GSE54993 ZFP36L2 678 0 5 65
GSE54994 ZFP36L2 678 9 1 43
GSE60625 ZFP36L2 678 0 3 8
GSE74703 ZFP36L2 678 3 1 32
GSE74704 ZFP36L2 678 10 1 9
TCGA ZFP36L2 678 35 2 59

Total number of gains: 91; Total number of losses: 22; Total Number of normals: 375.  


 

Somatic mutations of ZFP36L2:

 

Generating mutation plots.

 

Highly correlated genes for ZFP36L2:

 

Showing top 20/973 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZFP36L2APIP0.787063303
ZFP36L2THUMPD30.740859303
ZFP36L2PHLDB10.74075303
ZFP36L2TIRAP0.740348303
ZFP36L2ARL4C0.738295303
ZFP36L2NAGA0.736638303
ZFP36L2GPBP10.731222303
ZFP36L2MTIF30.728325303
ZFP36L2PLXNA40.714601303
ZFP36L2PIGP0.711043303
ZFP36L2UBE2E20.709132403
ZFP36L2ESYT20.70597303
ZFP36L2ZNF8290.703891303
ZFP36L2FAM47A0.7001303
ZFP36L2FAM193A0.697049303
ZFP36L2PIGA0.695383303
ZFP36L2SNAP290.693502303
ZFP36L2TRIP40.691071403
ZFP36L2NR5A20.690506403
ZFP36L2SLC41A20.686531303

For details and further investigation, click here