| Full name: synaptosome associated protein 29 | Alias Symbol: SNAP-29|CEDNIK | ||
| Type: protein-coding gene | Cytoband: 22q11.21 | ||
| Entrez ID: 9342 | HGNC ID: HGNC:11133 | Ensembl Gene: ENSG00000099940 | OMIM ID: 604202 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of SNAP29:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNAP29 | 9342 | 218327_s_at | 0.1092 | 0.7999 | |
| GSE20347 | SNAP29 | 9342 | 218327_s_at | -0.6933 | 0.0008 | |
| GSE23400 | SNAP29 | 9342 | 218327_s_at | -0.2398 | 0.0098 | |
| GSE26886 | SNAP29 | 9342 | 218327_s_at | 0.2042 | 0.5108 | |
| GSE29001 | SNAP29 | 9342 | 218327_s_at | -0.6209 | 0.0327 | |
| GSE38129 | SNAP29 | 9342 | 218327_s_at | -0.3759 | 0.0604 | |
| GSE45670 | SNAP29 | 9342 | 218327_s_at | 0.0820 | 0.8467 | |
| GSE53622 | SNAP29 | 9342 | 70706 | -0.1896 | 0.0257 | |
| GSE53624 | SNAP29 | 9342 | 70706 | -0.2125 | 0.0013 | |
| GSE63941 | SNAP29 | 9342 | 218327_s_at | 0.4020 | 0.5965 | |
| GSE77861 | SNAP29 | 9342 | 218327_s_at | -0.3034 | 0.3698 | |
| GSE97050 | SNAP29 | 9342 | A_24_P48862 | -0.2566 | 0.3157 | |
| SRP007169 | SNAP29 | 9342 | RNAseq | -0.1105 | 0.8220 | |
| SRP008496 | SNAP29 | 9342 | RNAseq | -0.0040 | 0.9910 | |
| SRP064894 | SNAP29 | 9342 | RNAseq | -0.3236 | 0.0453 | |
| SRP133303 | SNAP29 | 9342 | RNAseq | -0.2381 | 0.0180 | |
| SRP159526 | SNAP29 | 9342 | RNAseq | -0.4722 | 0.0503 | |
| SRP193095 | SNAP29 | 9342 | RNAseq | -0.4594 | 0.0000 | |
| SRP219564 | SNAP29 | 9342 | RNAseq | -0.2490 | 0.5195 | |
| TCGA | SNAP29 | 9342 | RNAseq | -0.1013 | 0.0387 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNAP29 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNAP29:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNAP29 | 9342 | 6 | 7 | 17 | |
| GSE20123 | SNAP29 | 9342 | 6 | 7 | 17 | |
| GSE43470 | SNAP29 | 9342 | 4 | 7 | 32 | |
| GSE46452 | SNAP29 | 9342 | 33 | 1 | 25 | |
| GSE47630 | SNAP29 | 9342 | 8 | 5 | 27 | |
| GSE54993 | SNAP29 | 9342 | 3 | 6 | 61 | |
| GSE54994 | SNAP29 | 9342 | 11 | 7 | 35 | |
| GSE60625 | SNAP29 | 9342 | 5 | 0 | 6 | |
| GSE74703 | SNAP29 | 9342 | 4 | 5 | 27 | |
| GSE74704 | SNAP29 | 9342 | 3 | 4 | 13 | |
| TCGA | SNAP29 | 9342 | 27 | 17 | 52 |
Total number of gains: 110; Total number of losses: 66; Total Number of normals: 312.
Somatic mutations of SNAP29:
Generating mutation plots.
Highly correlated genes for SNAP29:
Showing top 20/424 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNAP29 | EAF1 | 0.758598 | 3 | 0 | 3 |
| SNAP29 | ITCH | 0.728575 | 7 | 0 | 7 |
| SNAP29 | ZNF594 | 0.726485 | 3 | 0 | 3 |
| SNAP29 | IPMK | 0.721355 | 3 | 0 | 3 |
| SNAP29 | CTR9 | 0.720855 | 3 | 0 | 3 |
| SNAP29 | BCAP29 | 0.717833 | 5 | 0 | 4 |
| SNAP29 | THUMPD3 | 0.713664 | 4 | 0 | 4 |
| SNAP29 | C6orf163 | 0.703171 | 3 | 0 | 3 |
| SNAP29 | RIOK2 | 0.702551 | 4 | 0 | 3 |
| SNAP29 | FEM1C | 0.699448 | 5 | 0 | 4 |
| SNAP29 | ZFP36L2 | 0.693502 | 3 | 0 | 3 |
| SNAP29 | YWHAG | 0.692758 | 3 | 0 | 3 |
| SNAP29 | TRAPPC2L | 0.68615 | 3 | 0 | 3 |
| SNAP29 | ATG2B | 0.685224 | 3 | 0 | 3 |
| SNAP29 | APC | 0.68473 | 5 | 0 | 5 |
| SNAP29 | MTA3 | 0.683067 | 3 | 0 | 3 |
| SNAP29 | SOS2 | 0.682996 | 4 | 0 | 3 |
| SNAP29 | UBE2F | 0.682293 | 3 | 0 | 3 |
| SNAP29 | ATF7 | 0.68204 | 3 | 0 | 3 |
| SNAP29 | SLC25A46 | 0.6815 | 5 | 0 | 4 |
For details and further investigation, click here
