ZNF438

 

Full name: zinc finger protein 438 Alias Symbol: bA330O11.1
Type: protein-coding gene Cytoband: 10p11.23
Entrez ID: 220929 HGNC ID: HGNC:21029 Ensembl Gene: ENSG00000183621 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF438:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF438 220929 229743_at -0.1754 0.4135
GSE26886 ZNF438 220929 229743_at 0.1492 0.4934
GSE45670 ZNF438 220929 229743_at -0.5900 0.0002
GSE53622 ZNF438 220929 112649 -0.5491 0.0000
GSE53624 ZNF438 220929 112649 -0.2342 0.0009
GSE63941 ZNF438 220929 229743_at -0.7404 0.0289
GSE77861 ZNF438 220929 229743_at -0.2272 0.1485
GSE97050 ZNF438 220929 A_23_P161156 -0.2448 0.4488
SRP007169 ZNF438 220929 RNAseq -0.4825 0.3963
SRP008496 ZNF438 220929 RNAseq -0.8095 0.0516
SRP064894 ZNF438 220929 RNAseq 0.2330 0.3229
SRP133303 ZNF438 220929 RNAseq -0.2784 0.2387
SRP159526 ZNF438 220929 RNAseq -0.4843 0.0077
SRP193095 ZNF438 220929 RNAseq -0.3529 0.0121
SRP219564 ZNF438 220929 RNAseq -0.4460 0.3657
TCGA ZNF438 220929 RNAseq -0.1961 0.0163

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF438 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF438:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF438 220929 5 7 18
GSE20123 ZNF438 220929 5 6 19
GSE43470 ZNF438 220929 3 4 36
GSE46452 ZNF438 220929 1 14 44
GSE47630 ZNF438 220929 5 15 20
GSE54993 ZNF438 220929 9 0 61
GSE54994 ZNF438 220929 3 9 41
GSE60625 ZNF438 220929 0 0 11
GSE74703 ZNF438 220929 2 2 32
GSE74704 ZNF438 220929 0 5 15
TCGA ZNF438 220929 19 24 53

Total number of gains: 52; Total number of losses: 86; Total Number of normals: 350.  


 

Somatic mutations of ZNF438:

 

Generating mutation plots.

 

Highly correlated genes for ZNF438:

 

Showing top 20/717 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF438ZZEF10.769517303
ZNF438RGS7BP0.703242404
ZNF438USP9Y0.70171303
ZNF438FAM13B0.695222404
ZNF438ZBTB160.690686404
ZNF438ZBTB260.690034404
ZNF438PDZD40.687621303
ZNF438WDR480.685788403
ZNF438RWDD10.683424303
ZNF438RBM50.682536303
ZNF438RUNX1T10.682109404
ZNF438RIMKLB0.68203303
ZNF438CLIP30.680343505
ZNF438TMOD10.678753303
ZNF438ZBTB200.678708403
ZNF438KDM5D0.67763404
ZNF438ADAMTS50.676994505
ZNF438PPP3CB0.674658505
ZNF438RIC30.674161404
ZNF438NLGN10.673706606

For details and further investigation, click here