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Severity: Warning

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Filename: controllers/Result_pages.php

Line Number: 93

Backtrace:

File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
Line: 93
Function: exec

File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
Line: 399
Function: drawMutations

File: /data/webapp/var/www/html/ESCCdb/index.php
Line: 315
Function: require_once

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Severity: Warning

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Filename: controllers/Result_pages.php

Line Number: 97

Backtrace:

File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
Line: 97
Function: exec

File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
Line: 399
Function: drawMutations

File: /data/webapp/var/www/html/ESCCdb/index.php
Line: 315
Function: require_once

Multi-Omics Database of ESCC

 

PDZD4

 

Full name: PDZ domain containing 4 Alias Symbol: KIAA1444|LU1|FLJ34125|PDZRN4L|LNX5
Type: protein-coding gene Cytoband: Xq28
Entrez ID: 57595 HGNC ID: HGNC:21167 Ensembl Gene: ENSG00000067840 OMIM ID: 300634
Drug and gene relationship at DGIdb

 

Expression of PDZD4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PDZD4 57595 223543_at -0.2413 0.3681
GSE26886 PDZD4 57595 223543_at 0.1987 0.1350
GSE45670 PDZD4 57595 223543_at -0.0370 0.7256
GSE53622 PDZD4 57595 70750 -1.3833 0.0000
GSE53624 PDZD4 57595 70750 -0.6722 0.0000
GSE63941 PDZD4 57595 223543_at 0.4102 0.0456
GSE77861 PDZD4 57595 223543_at -0.1049 0.2996
GSE97050 PDZD4 57595 A_24_P265088 -0.6698 0.2237
SRP064894 PDZD4 57595 RNAseq -0.9007 0.0061
SRP133303 PDZD4 57595 RNAseq -0.6457 0.2161
SRP159526 PDZD4 57595 RNAseq -0.1957 0.7231
SRP219564 PDZD4 57595 RNAseq -0.8636 0.3531
TCGA PDZD4 57595 RNAseq -0.7475 0.0038

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by PDZD4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PDZD4:

 

No record found for this gene.


 

Somatic mutations of PDZD4:

 

Generating mutation plots.

 

Highly correlated genes for PDZD4:

 

Showing top 20/332 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PDZD4RBM240.828809303
PDZD4TCEAL20.79561303
PDZD4FXYD10.783325303
PDZD4PGR0.777724404
PDZD4KATNAL10.77328303
PDZD4RBPMS20.762902404
PDZD4PPP1R14A0.761139404
PDZD4SH3BGR0.753365404
PDZD4MYOM10.752639504
PDZD4CORO60.74036303
PDZD4AQP10.732218404
PDZD4ITGA70.728107404
PDZD4PTCHD10.727937404
PDZD4ZNF385D0.727741403
PDZD4CBX70.725199404
PDZD4ZMAT40.720897303
PDZD4C3orf700.720767404
PDZD4PCOLCE20.720087303
PDZD4IL1RAPL10.719919303
PDZD4KCNN30.718349403

For details and further investigation, click here