| Full name: zinc finger protein 562 | Alias Symbol: FLJ20079 | ||
| Type: protein-coding gene | Cytoband: 19p13.2 | ||
| Entrez ID: 54811 | HGNC ID: HGNC:25950 | Ensembl Gene: ENSG00000171466 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ZNF562:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZNF562 | 54811 | 219163_at | 0.3702 | 0.4882 | |
| GSE20347 | ZNF562 | 54811 | 219163_at | -0.3617 | 0.0241 | |
| GSE23400 | ZNF562 | 54811 | 219163_at | -0.1017 | 0.2059 | |
| GSE26886 | ZNF562 | 54811 | 219163_at | -0.4112 | 0.1093 | |
| GSE29001 | ZNF562 | 54811 | 219163_at | -0.4076 | 0.2394 | |
| GSE38129 | ZNF562 | 54811 | 219163_at | -0.1700 | 0.3320 | |
| GSE45670 | ZNF562 | 54811 | 219163_at | 0.4785 | 0.0006 | |
| GSE53622 | ZNF562 | 54811 | 134994 | -0.3617 | 0.0000 | |
| GSE53624 | ZNF562 | 54811 | 134994 | -0.5105 | 0.0000 | |
| GSE63941 | ZNF562 | 54811 | 219163_at | -0.6605 | 0.0836 | |
| GSE77861 | ZNF562 | 54811 | 219163_at | 0.2919 | 0.0472 | |
| GSE97050 | ZNF562 | 54811 | A_23_P95923 | 0.0369 | 0.9058 | |
| SRP007169 | ZNF562 | 54811 | RNAseq | -0.7474 | 0.0257 | |
| SRP008496 | ZNF562 | 54811 | RNAseq | -0.7698 | 0.0000 | |
| SRP064894 | ZNF562 | 54811 | RNAseq | -0.6711 | 0.0011 | |
| SRP133303 | ZNF562 | 54811 | RNAseq | -0.1535 | 0.2329 | |
| SRP159526 | ZNF562 | 54811 | RNAseq | -0.6096 | 0.0074 | |
| SRP193095 | ZNF562 | 54811 | RNAseq | -0.4981 | 0.0000 | |
| SRP219564 | ZNF562 | 54811 | RNAseq | -0.4420 | 0.3568 | |
| TCGA | ZNF562 | 54811 | RNAseq | -0.0345 | 0.5717 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ZNF562 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ZNF562:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZNF562 | 54811 | 4 | 2 | 24 | |
| GSE20123 | ZNF562 | 54811 | 3 | 1 | 26 | |
| GSE43470 | ZNF562 | 54811 | 3 | 6 | 34 | |
| GSE46452 | ZNF562 | 54811 | 47 | 1 | 11 | |
| GSE47630 | ZNF562 | 54811 | 5 | 7 | 28 | |
| GSE54993 | ZNF562 | 54811 | 16 | 3 | 51 | |
| GSE54994 | ZNF562 | 54811 | 7 | 13 | 33 | |
| GSE60625 | ZNF562 | 54811 | 9 | 0 | 2 | |
| GSE74703 | ZNF562 | 54811 | 3 | 4 | 29 | |
| GSE74704 | ZNF562 | 54811 | 0 | 1 | 19 | |
| TCGA | ZNF562 | 54811 | 10 | 18 | 68 |
Total number of gains: 107; Total number of losses: 56; Total Number of normals: 325.
Somatic mutations of ZNF562:
Generating mutation plots.
Highly correlated genes for ZNF562:
Showing top 20/283 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZNF562 | PEX13 | 0.734293 | 3 | 0 | 3 |
| ZNF562 | CNOT2 | 0.733322 | 3 | 0 | 3 |
| ZNF562 | SCFD1 | 0.71435 | 3 | 0 | 3 |
| ZNF562 | ZNF195 | 0.711597 | 5 | 0 | 4 |
| ZNF562 | SPCS3 | 0.708671 | 3 | 0 | 3 |
| ZNF562 | ZNF814 | 0.699454 | 3 | 0 | 3 |
| ZNF562 | ELOVL1 | 0.697661 | 3 | 0 | 3 |
| ZNF562 | GPATCH1 | 0.690526 | 3 | 0 | 3 |
| ZNF562 | RNF217 | 0.688965 | 3 | 0 | 3 |
| ZNF562 | NUAK2 | 0.688123 | 3 | 0 | 3 |
| ZNF562 | NEK4 | 0.685124 | 3 | 0 | 3 |
| ZNF562 | ZNF101 | 0.681987 | 4 | 0 | 4 |
| ZNF562 | ZMYND19 | 0.679512 | 4 | 0 | 3 |
| ZNF562 | PSENEN | 0.678527 | 3 | 0 | 3 |
| ZNF562 | PAK1IP1 | 0.671228 | 5 | 0 | 5 |
| ZNF562 | ZNF776 | 0.668904 | 3 | 0 | 3 |
| ZNF562 | MED23 | 0.665203 | 4 | 0 | 3 |
| ZNF562 | DDI2 | 0.664554 | 3 | 0 | 3 |
| ZNF562 | ALKBH6 | 0.661539 | 3 | 0 | 3 |
| ZNF562 | PSMD1 | 0.659014 | 3 | 0 | 3 |
For details and further investigation, click here
