| Full name: peroxisomal biogenesis factor 13 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 2p15 | ||
| Entrez ID: 5194 | HGNC ID: HGNC:8855 | Ensembl Gene: ENSG00000162928 | OMIM ID: 601789 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of PEX13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PEX13 | 5194 | 235093_at | 0.5214 | 0.2325 | |
| GSE20347 | PEX13 | 5194 | 205246_at | 0.0699 | 0.7327 | |
| GSE23400 | PEX13 | 5194 | 205246_at | 0.0724 | 0.4185 | |
| GSE26886 | PEX13 | 5194 | 235093_at | -0.2246 | 0.4350 | |
| GSE29001 | PEX13 | 5194 | 205246_at | -0.0168 | 0.9617 | |
| GSE38129 | PEX13 | 5194 | 205246_at | 0.5237 | 0.0114 | |
| GSE45670 | PEX13 | 5194 | 235093_at | 0.1040 | 0.4688 | |
| GSE53622 | PEX13 | 5194 | 12504 | -0.0963 | 0.2014 | |
| GSE53624 | PEX13 | 5194 | 12504 | 0.0049 | 0.9617 | |
| GSE63941 | PEX13 | 5194 | 235093_at | 0.3121 | 0.3650 | |
| GSE77861 | PEX13 | 5194 | 205246_at | 0.1480 | 0.7041 | |
| GSE97050 | PEX13 | 5194 | A_23_P257131 | 0.4233 | 0.4280 | |
| SRP007169 | PEX13 | 5194 | RNAseq | -0.4125 | 0.2036 | |
| SRP008496 | PEX13 | 5194 | RNAseq | -0.2913 | 0.0892 | |
| SRP064894 | PEX13 | 5194 | RNAseq | -0.1965 | 0.2402 | |
| SRP133303 | PEX13 | 5194 | RNAseq | 0.3422 | 0.0297 | |
| SRP159526 | PEX13 | 5194 | RNAseq | -0.0138 | 0.9402 | |
| SRP193095 | PEX13 | 5194 | RNAseq | -0.2260 | 0.0361 | |
| SRP219564 | PEX13 | 5194 | RNAseq | -0.2108 | 0.5955 | |
| TCGA | PEX13 | 5194 | RNAseq | 0.0703 | 0.1588 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PEX13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PEX13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PEX13 | 5194 | 12 | 0 | 18 | |
| GSE20123 | PEX13 | 5194 | 11 | 0 | 19 | |
| GSE43470 | PEX13 | 5194 | 7 | 0 | 36 | |
| GSE46452 | PEX13 | 5194 | 2 | 3 | 54 | |
| GSE47630 | PEX13 | 5194 | 8 | 0 | 32 | |
| GSE54993 | PEX13 | 5194 | 0 | 6 | 64 | |
| GSE54994 | PEX13 | 5194 | 12 | 0 | 41 | |
| GSE60625 | PEX13 | 5194 | 0 | 3 | 8 | |
| GSE74703 | PEX13 | 5194 | 7 | 0 | 29 | |
| GSE74704 | PEX13 | 5194 | 10 | 0 | 10 | |
| TCGA | PEX13 | 5194 | 36 | 3 | 57 |
Total number of gains: 105; Total number of losses: 15; Total Number of normals: 368.
Somatic mutations of PEX13:
Generating mutation plots.
Highly correlated genes for PEX13:
Showing top 20/469 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PEX13 | TRUB2 | 0.787576 | 3 | 0 | 3 |
| PEX13 | UBTD2 | 0.772199 | 3 | 0 | 3 |
| PEX13 | KPNB1 | 0.751229 | 3 | 0 | 3 |
| PEX13 | SLC25A5 | 0.750077 | 3 | 0 | 3 |
| PEX13 | LSM14B | 0.744731 | 3 | 0 | 3 |
| PEX13 | RRAGC | 0.74314 | 4 | 0 | 4 |
| PEX13 | ZNF562 | 0.734293 | 3 | 0 | 3 |
| PEX13 | ALG1 | 0.730152 | 3 | 0 | 3 |
| PEX13 | RASA2 | 0.729358 | 3 | 0 | 3 |
| PEX13 | POLR3F | 0.719145 | 3 | 0 | 3 |
| PEX13 | UBE2C | 0.70802 | 3 | 0 | 3 |
| PEX13 | KDELR2 | 0.707848 | 6 | 0 | 6 |
| PEX13 | NUP85 | 0.707842 | 3 | 0 | 3 |
| PEX13 | ZCCHC8 | 0.706409 | 3 | 0 | 3 |
| PEX13 | RNF19B | 0.705538 | 3 | 0 | 3 |
| PEX13 | UBE2A | 0.703014 | 3 | 0 | 3 |
| PEX13 | GET4 | 0.700746 | 3 | 0 | 3 |
| PEX13 | EGFL6 | 0.697932 | 3 | 0 | 3 |
| PEX13 | DEK | 0.694912 | 3 | 0 | 3 |
| PEX13 | HRH1 | 0.693984 | 3 | 0 | 3 |
For details and further investigation, click here
