| Full name: Yip1 domain family member 3 | Alias Symbol: DKFZp566C243|KLIP1|dJ337H4.3|FinGER3 | ||
| Type: protein-coding gene | Cytoband: 6p21.1 | ||
| Entrez ID: 25844 | HGNC ID: HGNC:21023 | Ensembl Gene: ENSG00000137207 | OMIM ID: 609775 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of YIPF3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | YIPF3 | 25844 | 216338_s_at | 0.1375 | 0.8266 | |
| GSE20347 | YIPF3 | 25844 | 216338_s_at | -0.4676 | 0.0033 | |
| GSE23400 | YIPF3 | 25844 | 216338_s_at | -0.0982 | 0.0612 | |
| GSE26886 | YIPF3 | 25844 | 216338_s_at | 0.4104 | 0.0222 | |
| GSE29001 | YIPF3 | 25844 | 216338_s_at | -0.3930 | 0.2635 | |
| GSE38129 | YIPF3 | 25844 | 216338_s_at | -0.0441 | 0.8056 | |
| GSE45670 | YIPF3 | 25844 | 216338_s_at | 0.0572 | 0.7501 | |
| GSE53622 | YIPF3 | 25844 | 30012 | -0.1346 | 0.0186 | |
| GSE53624 | YIPF3 | 25844 | 30012 | -0.0822 | 0.1704 | |
| GSE63941 | YIPF3 | 25844 | 216338_s_at | -0.4028 | 0.2667 | |
| GSE77861 | YIPF3 | 25844 | 216338_s_at | -0.2014 | 0.3716 | |
| GSE97050 | YIPF3 | 25844 | A_23_P111005 | 0.4118 | 0.1782 | |
| SRP007169 | YIPF3 | 25844 | RNAseq | -1.1356 | 0.0003 | |
| SRP008496 | YIPF3 | 25844 | RNAseq | -0.9747 | 0.0000 | |
| SRP064894 | YIPF3 | 25844 | RNAseq | 0.0988 | 0.6876 | |
| SRP133303 | YIPF3 | 25844 | RNAseq | 0.0056 | 0.9699 | |
| SRP159526 | YIPF3 | 25844 | RNAseq | 0.0367 | 0.7885 | |
| SRP193095 | YIPF3 | 25844 | RNAseq | -0.1726 | 0.1785 | |
| SRP219564 | YIPF3 | 25844 | RNAseq | 0.0695 | 0.7248 | |
| TCGA | YIPF3 | 25844 | RNAseq | -0.0847 | 0.0539 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by YIPF3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of YIPF3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | YIPF3 | 25844 | 7 | 0 | 23 | |
| GSE20123 | YIPF3 | 25844 | 7 | 0 | 23 | |
| GSE43470 | YIPF3 | 25844 | 6 | 0 | 37 | |
| GSE46452 | YIPF3 | 25844 | 2 | 9 | 48 | |
| GSE47630 | YIPF3 | 25844 | 8 | 4 | 28 | |
| GSE54993 | YIPF3 | 25844 | 3 | 2 | 65 | |
| GSE54994 | YIPF3 | 25844 | 11 | 4 | 38 | |
| GSE60625 | YIPF3 | 25844 | 0 | 1 | 10 | |
| GSE74703 | YIPF3 | 25844 | 6 | 0 | 30 | |
| GSE74704 | YIPF3 | 25844 | 3 | 0 | 17 | |
| TCGA | YIPF3 | 25844 | 20 | 12 | 64 |
Total number of gains: 73; Total number of losses: 32; Total Number of normals: 383.
Somatic mutations of YIPF3:
Generating mutation plots.
Highly correlated genes for YIPF3:
Showing top 20/309 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| YIPF3 | HGS | 0.808402 | 3 | 0 | 3 |
| YIPF3 | ZSCAN12 | 0.808002 | 3 | 0 | 3 |
| YIPF3 | RHBDD2 | 0.792793 | 3 | 0 | 3 |
| YIPF3 | PLEKHM2 | 0.790535 | 3 | 0 | 3 |
| YIPF3 | KEAP1 | 0.783363 | 3 | 0 | 3 |
| YIPF3 | RNFT2 | 0.783192 | 3 | 0 | 3 |
| YIPF3 | FBXL14 | 0.781172 | 3 | 0 | 3 |
| YIPF3 | NR2F6 | 0.773479 | 3 | 0 | 3 |
| YIPF3 | MBOAT1 | 0.77332 | 3 | 0 | 3 |
| YIPF3 | PCNT | 0.768321 | 3 | 0 | 3 |
| YIPF3 | FAU | 0.758761 | 3 | 0 | 3 |
| YIPF3 | EI24 | 0.755083 | 3 | 0 | 3 |
| YIPF3 | ABHD16A | 0.754304 | 5 | 0 | 4 |
| YIPF3 | DUS3L | 0.753157 | 3 | 0 | 3 |
| YIPF3 | ATAT1 | 0.749739 | 3 | 0 | 3 |
| YIPF3 | SSBP4 | 0.736304 | 3 | 0 | 3 |
| YIPF3 | ZNF277 | 0.722736 | 3 | 0 | 3 |
| YIPF3 | SPNS1 | 0.720664 | 3 | 0 | 3 |
| YIPF3 | C1orf122 | 0.719637 | 3 | 0 | 3 |
| YIPF3 | FDXACB1 | 0.719548 | 3 | 0 | 3 |
For details and further investigation, click here
