AHDC1

 

Full name: AT-hook DNA binding motif containing 1 Alias Symbol: DJ159A19.3|RP1-159A19.1
Type: protein-coding gene Cytoband: 1p36.11-p35.3
Entrez ID: 27245 HGNC ID: HGNC:25230 Ensembl Gene: ENSG00000126705 OMIM ID: 615790
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of AHDC1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 AHDC1 27245 205002_at -0.6711 0.1842
GSE20347 AHDC1 27245 205002_at -0.8191 0.0001
GSE23400 AHDC1 27245 205002_at -0.4900 0.0000
GSE26886 AHDC1 27245 205002_at -0.1247 0.5568
GSE29001 AHDC1 27245 205002_at -0.4906 0.0105
GSE38129 AHDC1 27245 205002_at -0.6089 0.0005
GSE45670 AHDC1 27245 205002_at -0.4977 0.0093
GSE53622 AHDC1 27245 37270 -0.7899 0.0000
GSE53624 AHDC1 27245 37270 -0.7248 0.0000
GSE63941 AHDC1 27245 205002_at 0.0184 0.9600
GSE77861 AHDC1 27245 229379_at -0.2082 0.0664
GSE97050 AHDC1 27245 A_33_P3215797 -0.2259 0.3436
SRP007169 AHDC1 27245 RNAseq -0.4271 0.2995
SRP008496 AHDC1 27245 RNAseq -0.6155 0.0897
SRP064894 AHDC1 27245 RNAseq -1.1288 0.0000
SRP133303 AHDC1 27245 RNAseq -0.9757 0.0000
SRP159526 AHDC1 27245 RNAseq -0.6576 0.0504
SRP193095 AHDC1 27245 RNAseq -0.7501 0.0008
SRP219564 AHDC1 27245 RNAseq -1.4961 0.0016
TCGA AHDC1 27245 RNAseq -0.0059 0.9189

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by AHDC1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of AHDC1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 AHDC1 27245 0 6 24
GSE20123 AHDC1 27245 0 5 25
GSE43470 AHDC1 27245 4 6 33
GSE46452 AHDC1 27245 5 1 53
GSE47630 AHDC1 27245 8 3 29
GSE54993 AHDC1 27245 2 1 67
GSE54994 AHDC1 27245 10 4 39
GSE60625 AHDC1 27245 0 0 11
GSE74703 AHDC1 27245 3 4 29
GSE74704 AHDC1 27245 0 0 20
TCGA AHDC1 27245 11 23 62

Total number of gains: 43; Total number of losses: 53; Total Number of normals: 392.  


 

Somatic mutations of AHDC1:

 

Generating mutation plots.

 

Highly correlated genes for AHDC1:

 

Showing top 20/1115 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
AHDC1SMDT10.724805303
AHDC1FAM95B10.720381303
AHDC1C5orf66-AS10.716369404
AHDC1PLEKHN10.715921605
AHDC1ATG9B0.715179606
AHDC1AIF1L0.706528505
AHDC1RAET1E0.704377505
AHDC1TTC90.694076908
AHDC1MUC200.692238505
AHDC1TPRN0.691787404
AHDC1B3GALT40.689361707
AHDC1CLDND20.689301303
AHDC1TMEM38A0.688083303
AHDC1VSIG10L0.687069605
AHDC1IL12A-AS10.684893505
AHDC1SLURP10.683602909
AHDC1ZHX10.677536605
AHDC1SPRR2B0.675006303
AHDC1SPINK70.674788505
AHDC1PPL0.674445909

For details and further investigation, click here