| Full name: ankyrin repeat domain 39 | Alias Symbol: MGC41816 | ||
| Type: protein-coding gene | Cytoband: 2q11.2 | ||
| Entrez ID: 51239 | HGNC ID: HGNC:28640 | Ensembl Gene: ENSG00000213337 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ANKRD39:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ANKRD39 | 51239 | 223532_at | 0.4556 | 0.1573 | |
| GSE26886 | ANKRD39 | 51239 | 223532_at | 0.8809 | 0.0001 | |
| GSE45670 | ANKRD39 | 51239 | 223532_at | 0.2149 | 0.1695 | |
| GSE53622 | ANKRD39 | 51239 | 4996 | 0.6020 | 0.0000 | |
| GSE53624 | ANKRD39 | 51239 | 4996 | 0.7678 | 0.0000 | |
| GSE63941 | ANKRD39 | 51239 | 223532_at | 0.6115 | 0.2468 | |
| GSE77861 | ANKRD39 | 51239 | 223532_at | 0.2435 | 0.0249 | |
| GSE97050 | ANKRD39 | 51239 | A_33_P3294053 | 0.1389 | 0.5593 | |
| SRP007169 | ANKRD39 | 51239 | RNAseq | 0.3815 | 0.6034 | |
| SRP064894 | ANKRD39 | 51239 | RNAseq | 0.7159 | 0.0209 | |
| SRP133303 | ANKRD39 | 51239 | RNAseq | 0.7080 | 0.0001 | |
| SRP159526 | ANKRD39 | 51239 | RNAseq | 1.4266 | 0.0004 | |
| SRP193095 | ANKRD39 | 51239 | RNAseq | 0.4234 | 0.0001 | |
| SRP219564 | ANKRD39 | 51239 | RNAseq | 0.7656 | 0.1917 | |
| TCGA | ANKRD39 | 51239 | RNAseq | 0.3697 | 0.0003 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by ANKRD39 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ANKRD39:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ANKRD39 | 51239 | 6 | 2 | 22 | |
| GSE20123 | ANKRD39 | 51239 | 6 | 2 | 22 | |
| GSE43470 | ANKRD39 | 51239 | 2 | 3 | 38 | |
| GSE46452 | ANKRD39 | 51239 | 2 | 3 | 54 | |
| GSE47630 | ANKRD39 | 51239 | 7 | 0 | 33 | |
| GSE54993 | ANKRD39 | 51239 | 0 | 6 | 64 | |
| GSE54994 | ANKRD39 | 51239 | 11 | 0 | 42 | |
| GSE60625 | ANKRD39 | 51239 | 0 | 3 | 8 | |
| GSE74703 | ANKRD39 | 51239 | 2 | 2 | 32 | |
| GSE74704 | ANKRD39 | 51239 | 4 | 1 | 15 | |
| TCGA | ANKRD39 | 51239 | 35 | 3 | 58 |
Total number of gains: 75; Total number of losses: 25; Total Number of normals: 388.
Somatic mutations of ANKRD39:
Generating mutation plots.
Highly correlated genes for ANKRD39:
Showing top 20/879 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ANKRD39 | ERP29 | 0.715616 | 3 | 0 | 3 |
| ANKRD39 | PPT1 | 0.707506 | 6 | 0 | 5 |
| ANKRD39 | RUNDC1 | 0.701573 | 3 | 0 | 3 |
| ANKRD39 | FBXO21 | 0.697001 | 3 | 0 | 3 |
| ANKRD39 | C18orf54 | 0.692133 | 3 | 0 | 3 |
| ANKRD39 | TMEM161A | 0.690858 | 4 | 0 | 4 |
| ANKRD39 | CRKL | 0.690165 | 4 | 0 | 4 |
| ANKRD39 | HOXC9 | 0.682776 | 3 | 0 | 3 |
| ANKRD39 | MRPS23 | 0.682282 | 6 | 0 | 5 |
| ANKRD39 | ATP6V0B | 0.680211 | 3 | 0 | 3 |
| ANKRD39 | SMYD3 | 0.674307 | 5 | 0 | 3 |
| ANKRD39 | ADSL | 0.667139 | 6 | 0 | 6 |
| ANKRD39 | PRR15 | 0.666212 | 3 | 0 | 3 |
| ANKRD39 | POLRMT | 0.665893 | 3 | 0 | 3 |
| ANKRD39 | WDR18 | 0.663853 | 3 | 0 | 3 |
| ANKRD39 | BOD1 | 0.663783 | 6 | 0 | 5 |
| ANKRD39 | FUBP1 | 0.663229 | 3 | 0 | 3 |
| ANKRD39 | RASL11B | 0.661427 | 4 | 0 | 3 |
| ANKRD39 | TIGD1 | 0.660801 | 3 | 0 | 3 |
| ANKRD39 | NDUFB9 | 0.660634 | 6 | 0 | 6 |
For details and further investigation, click here
