| Full name: ARVCF delta catenin family member | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 22q11.21 | ||
| Entrez ID: 421 | HGNC ID: HGNC:728 | Ensembl Gene: ENSG00000099889 | OMIM ID: 602269 |
| Drug and gene relationship at DGIdb | |||
Expression of ARVCF:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ARVCF | 421 | 205784_x_at | 0.1343 | 0.6433 | |
| GSE20347 | ARVCF | 421 | 205784_x_at | 0.1148 | 0.2490 | |
| GSE23400 | ARVCF | 421 | 205784_x_at | -0.0052 | 0.9235 | |
| GSE26886 | ARVCF | 421 | 205784_x_at | 0.4448 | 0.0020 | |
| GSE29001 | ARVCF | 421 | 205784_x_at | -0.0401 | 0.8582 | |
| GSE38129 | ARVCF | 421 | 205784_x_at | -0.0236 | 0.8379 | |
| GSE45670 | ARVCF | 421 | 205784_x_at | 0.0188 | 0.8731 | |
| GSE53622 | ARVCF | 421 | 79643 | 0.5468 | 0.0003 | |
| GSE53624 | ARVCF | 421 | 79643 | 0.9279 | 0.0000 | |
| GSE63941 | ARVCF | 421 | 205784_x_at | 0.3102 | 0.1354 | |
| GSE77861 | ARVCF | 421 | 205784_x_at | 0.0520 | 0.7676 | |
| GSE97050 | ARVCF | 421 | A_33_P3236993 | -0.0656 | 0.7700 | |
| SRP007169 | ARVCF | 421 | RNAseq | 2.7915 | 0.0003 | |
| SRP008496 | ARVCF | 421 | RNAseq | 3.1484 | 0.0000 | |
| SRP064894 | ARVCF | 421 | RNAseq | 1.2422 | 0.0000 | |
| SRP133303 | ARVCF | 421 | RNAseq | 0.4978 | 0.0425 | |
| SRP159526 | ARVCF | 421 | RNAseq | 1.2529 | 0.0063 | |
| SRP193095 | ARVCF | 421 | RNAseq | 1.4246 | 0.0000 | |
| SRP219564 | ARVCF | 421 | RNAseq | 0.4880 | 0.3854 | |
| TCGA | ARVCF | 421 | RNAseq | -0.1376 | 0.1422 |
Upregulated datasets: 5; Downregulated datasets: 0.
Survival by ARVCF expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ARVCF:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ARVCF | 421 | 5 | 7 | 18 | |
| GSE20123 | ARVCF | 421 | 5 | 7 | 18 | |
| GSE43470 | ARVCF | 421 | 4 | 7 | 32 | |
| GSE46452 | ARVCF | 421 | 33 | 1 | 25 | |
| GSE47630 | ARVCF | 421 | 8 | 5 | 27 | |
| GSE54993 | ARVCF | 421 | 3 | 6 | 61 | |
| GSE54994 | ARVCF | 421 | 12 | 7 | 34 | |
| GSE60625 | ARVCF | 421 | 5 | 0 | 6 | |
| GSE74703 | ARVCF | 421 | 4 | 5 | 27 | |
| GSE74704 | ARVCF | 421 | 3 | 4 | 13 | |
| TCGA | ARVCF | 421 | 27 | 17 | 52 |
Total number of gains: 109; Total number of losses: 66; Total Number of normals: 313.
Somatic mutations of ARVCF:
Generating mutation plots.
Highly correlated genes for ARVCF:
Showing top 20/977 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ARVCF | TMEM102 | 0.867978 | 3 | 0 | 3 |
| ARVCF | PGC | 0.791054 | 3 | 0 | 3 |
| ARVCF | SP7 | 0.76384 | 3 | 0 | 3 |
| ARVCF | ZNF524 | 0.761659 | 3 | 0 | 3 |
| ARVCF | EVX1 | 0.758861 | 7 | 0 | 6 |
| ARVCF | PRR7 | 0.756051 | 3 | 0 | 3 |
| ARVCF | AMN | 0.755556 | 7 | 0 | 7 |
| ARVCF | SCARF2 | 0.750096 | 3 | 0 | 3 |
| ARVCF | FZD9 | 0.749885 | 5 | 0 | 5 |
| ARVCF | LUZP1 | 0.748781 | 3 | 0 | 3 |
| ARVCF | IGHMBP2 | 0.748636 | 4 | 0 | 4 |
| ARVCF | SP8 | 0.746367 | 4 | 0 | 3 |
| ARVCF | TCL6 | 0.743509 | 3 | 0 | 3 |
| ARVCF | JSRP1 | 0.742506 | 4 | 0 | 3 |
| ARVCF | PSD | 0.73724 | 5 | 0 | 5 |
| ARVCF | LRCH4 | 0.733813 | 4 | 0 | 4 |
| ARVCF | SCUBE1 | 0.731484 | 5 | 0 | 4 |
| ARVCF | TEX13B | 0.726567 | 5 | 0 | 4 |
| ARVCF | KCNH4 | 0.721437 | 5 | 0 | 5 |
| ARVCF | HSF4 | 0.720274 | 6 | 0 | 5 |
For details and further investigation, click here
