| Full name: scavenger receptor class F member 2 | Alias Symbol: SREC-II|SREC2|HUMZD58C02 | ||
| Type: protein-coding gene | Cytoband: 22q11.21 | ||
| Entrez ID: 91179 | HGNC ID: HGNC:19869 | Ensembl Gene: ENSG00000244486 | OMIM ID: 613619 |
| Drug and gene relationship at DGIdb | |||
Expression of SCARF2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SCARF2 | 91179 | 227557_at | 0.4905 | 0.2190 | |
| GSE26886 | SCARF2 | 91179 | 227557_at | 0.7031 | 0.0001 | |
| GSE45670 | SCARF2 | 91179 | 239454_at | 0.0427 | 0.6973 | |
| GSE53622 | SCARF2 | 91179 | 58520 | -0.3123 | 0.0000 | |
| GSE53624 | SCARF2 | 91179 | 58520 | -0.3266 | 0.0000 | |
| GSE63941 | SCARF2 | 91179 | 227557_at | -0.8826 | 0.0100 | |
| GSE77861 | SCARF2 | 91179 | 239454_at | -0.1537 | 0.2136 | |
| GSE97050 | SCARF2 | 91179 | A_24_P108738 | -0.0343 | 0.8691 | |
| SRP007169 | SCARF2 | 91179 | RNAseq | 3.8255 | 0.0003 | |
| SRP064894 | SCARF2 | 91179 | RNAseq | 1.7065 | 0.0000 | |
| SRP133303 | SCARF2 | 91179 | RNAseq | 1.4977 | 0.0001 | |
| SRP159526 | SCARF2 | 91179 | RNAseq | 1.1599 | 0.0049 | |
| SRP193095 | SCARF2 | 91179 | RNAseq | 2.4192 | 0.0000 | |
| SRP219564 | SCARF2 | 91179 | RNAseq | 1.1556 | 0.0287 | |
| TCGA | SCARF2 | 91179 | RNAseq | 0.1940 | 0.1379 |
Upregulated datasets: 6; Downregulated datasets: 0.
Survival by SCARF2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SCARF2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SCARF2 | 91179 | 5 | 7 | 18 | |
| GSE20123 | SCARF2 | 91179 | 5 | 7 | 18 | |
| GSE43470 | SCARF2 | 91179 | 4 | 7 | 32 | |
| GSE46452 | SCARF2 | 91179 | 33 | 1 | 25 | |
| GSE47630 | SCARF2 | 91179 | 8 | 5 | 27 | |
| GSE54993 | SCARF2 | 91179 | 3 | 6 | 61 | |
| GSE54994 | SCARF2 | 91179 | 11 | 8 | 34 | |
| GSE60625 | SCARF2 | 91179 | 5 | 0 | 6 | |
| GSE74703 | SCARF2 | 91179 | 4 | 5 | 27 | |
| GSE74704 | SCARF2 | 91179 | 3 | 4 | 13 | |
| TCGA | SCARF2 | 91179 | 27 | 17 | 52 |
Total number of gains: 108; Total number of losses: 67; Total Number of normals: 313.
Somatic mutations of SCARF2:
Generating mutation plots.
Highly correlated genes for SCARF2:
Showing top 20/200 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SCARF2 | PKLR | 0.779603 | 3 | 0 | 3 |
| SCARF2 | ZIC1 | 0.77752 | 3 | 0 | 3 |
| SCARF2 | EBF4 | 0.773982 | 3 | 0 | 3 |
| SCARF2 | SIGLEC8 | 0.768865 | 3 | 0 | 3 |
| SCARF2 | ISLR2 | 0.762982 | 3 | 0 | 3 |
| SCARF2 | C11orf94 | 0.762469 | 3 | 0 | 3 |
| SCARF2 | KCNF1 | 0.762409 | 3 | 0 | 3 |
| SCARF2 | JSRP1 | 0.761864 | 3 | 0 | 3 |
| SCARF2 | LELP1 | 0.759778 | 3 | 0 | 3 |
| SCARF2 | TMEM52 | 0.757909 | 3 | 0 | 3 |
| SCARF2 | FAM163B | 0.756738 | 3 | 0 | 3 |
| SCARF2 | FBXO15 | 0.753385 | 3 | 0 | 3 |
| SCARF2 | IGFN1 | 0.752415 | 3 | 0 | 3 |
| SCARF2 | SPRED3 | 0.751771 | 3 | 0 | 3 |
| SCARF2 | ZAN | 0.750933 | 3 | 0 | 3 |
| SCARF2 | ARVCF | 0.750096 | 3 | 0 | 3 |
| SCARF2 | LDHC | 0.746617 | 3 | 0 | 3 |
| SCARF2 | ADAMTS13 | 0.742655 | 3 | 0 | 3 |
| SCARF2 | SCN9A | 0.740239 | 3 | 0 | 3 |
| SCARF2 | C19orf44 | 0.73934 | 3 | 0 | 3 |
For details and further investigation, click here
