| Full name: beta-1,3-N-acetylgalactosaminyltransferase 2 | Alias Symbol: MGC39558 | ||
| Type: protein-coding gene | Cytoband: 1q42.3 | ||
| Entrez ID: 148789 | HGNC ID: HGNC:28596 | Ensembl Gene: ENSG00000162885 | OMIM ID: 610194 |
| Drug and gene relationship at DGIdb | |||
Expression of B3GALNT2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | B3GALNT2 | 148789 | 226233_at | 0.2684 | 0.5560 | |
| GSE26886 | B3GALNT2 | 148789 | 226233_at | -0.0389 | 0.8923 | |
| GSE45670 | B3GALNT2 | 148789 | 226233_at | 0.0734 | 0.6451 | |
| GSE53622 | B3GALNT2 | 148789 | 141550 | 0.1057 | 0.1275 | |
| GSE53624 | B3GALNT2 | 148789 | 141550 | 0.6104 | 0.0000 | |
| GSE63941 | B3GALNT2 | 148789 | 226233_at | 0.2860 | 0.4777 | |
| GSE77861 | B3GALNT2 | 148789 | 226233_at | 0.3273 | 0.1984 | |
| GSE97050 | B3GALNT2 | 148789 | A_23_P334751 | -0.3419 | 0.2198 | |
| SRP007169 | B3GALNT2 | 148789 | RNAseq | 0.8779 | 0.0118 | |
| SRP008496 | B3GALNT2 | 148789 | RNAseq | 1.2409 | 0.0000 | |
| SRP064894 | B3GALNT2 | 148789 | RNAseq | -0.1812 | 0.3258 | |
| SRP133303 | B3GALNT2 | 148789 | RNAseq | 0.1365 | 0.3940 | |
| SRP159526 | B3GALNT2 | 148789 | RNAseq | -0.0165 | 0.9643 | |
| SRP193095 | B3GALNT2 | 148789 | RNAseq | 0.0884 | 0.4418 | |
| SRP219564 | B3GALNT2 | 148789 | RNAseq | -0.2247 | 0.5277 | |
| TCGA | B3GALNT2 | 148789 | RNAseq | -0.1197 | 0.0096 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by B3GALNT2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of B3GALNT2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | B3GALNT2 | 148789 | 10 | 0 | 20 | |
| GSE20123 | B3GALNT2 | 148789 | 11 | 0 | 19 | |
| GSE43470 | B3GALNT2 | 148789 | 8 | 1 | 34 | |
| GSE46452 | B3GALNT2 | 148789 | 4 | 2 | 53 | |
| GSE47630 | B3GALNT2 | 148789 | 15 | 0 | 25 | |
| GSE54993 | B3GALNT2 | 148789 | 0 | 6 | 64 | |
| GSE54994 | B3GALNT2 | 148789 | 16 | 0 | 37 | |
| GSE60625 | B3GALNT2 | 148789 | 0 | 0 | 11 | |
| GSE74703 | B3GALNT2 | 148789 | 8 | 1 | 27 | |
| GSE74704 | B3GALNT2 | 148789 | 5 | 0 | 15 | |
| TCGA | B3GALNT2 | 148789 | 43 | 4 | 49 |
Total number of gains: 120; Total number of losses: 14; Total Number of normals: 354.
Somatic mutations of B3GALNT2:
Generating mutation plots.
Highly correlated genes for B3GALNT2:
Showing top 20/476 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| B3GALNT2 | ZXDB | 0.822942 | 3 | 0 | 3 |
| B3GALNT2 | RFX5 | 0.819202 | 3 | 0 | 3 |
| B3GALNT2 | PCGF6 | 0.816184 | 3 | 0 | 3 |
| B3GALNT2 | PHIP | 0.796858 | 3 | 0 | 3 |
| B3GALNT2 | ZSCAN29 | 0.787709 | 3 | 0 | 3 |
| B3GALNT2 | SRSF6 | 0.786974 | 3 | 0 | 3 |
| B3GALNT2 | ERP27 | 0.782493 | 3 | 0 | 3 |
| B3GALNT2 | DUT | 0.778962 | 3 | 0 | 3 |
| B3GALNT2 | FAM76B | 0.757399 | 3 | 0 | 3 |
| B3GALNT2 | METTL23 | 0.754691 | 3 | 0 | 3 |
| B3GALNT2 | GLS | 0.751468 | 3 | 0 | 3 |
| B3GALNT2 | CBX5 | 0.748216 | 3 | 0 | 3 |
| B3GALNT2 | SPCS2 | 0.746244 | 3 | 0 | 3 |
| B3GALNT2 | ZNF641 | 0.743902 | 3 | 0 | 3 |
| B3GALNT2 | TWSG1 | 0.734168 | 3 | 0 | 3 |
| B3GALNT2 | MLH1 | 0.727917 | 3 | 0 | 3 |
| B3GALNT2 | FAN1 | 0.72095 | 3 | 0 | 3 |
| B3GALNT2 | ZNF567 | 0.720437 | 4 | 0 | 3 |
| B3GALNT2 | MON1A | 0.712542 | 3 | 0 | 3 |
| B3GALNT2 | HYLS1 | 0.712391 | 4 | 0 | 3 |
For details and further investigation, click here
