| Full name: chromosome 11 open reading frame 42 | Alias Symbol: MGC34805 | ||
| Type: protein-coding gene | Cytoband: 11p15.4 | ||
| Entrez ID: 160298 | HGNC ID: HGNC:28541 | Ensembl Gene: ENSG00000180878 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C11orf42:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C11orf42 | 160298 | 1553895_at | 0.1626 | 0.4237 | |
| GSE26886 | C11orf42 | 160298 | 1553895_at | 0.0064 | 0.9593 | |
| GSE45670 | C11orf42 | 160298 | 1553895_at | 0.0993 | 0.2802 | |
| GSE53622 | C11orf42 | 160298 | 32335 | 0.0632 | 0.4999 | |
| GSE53624 | C11orf42 | 160298 | 32335 | -0.1868 | 0.0897 | |
| GSE63941 | C11orf42 | 160298 | 1553895_at | 0.2325 | 0.1687 | |
| GSE77861 | C11orf42 | 160298 | 1553895_at | -0.0726 | 0.5046 | |
| GSE97050 | C11orf42 | 160298 | A_32_P511713 | -0.0732 | 0.7029 | |
| TCGA | C11orf42 | 160298 | RNAseq | -1.0934 | 0.0158 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by C11orf42 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C11orf42:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C11orf42 | 160298 | 1 | 11 | 18 | |
| GSE20123 | C11orf42 | 160298 | 1 | 11 | 18 | |
| GSE43470 | C11orf42 | 160298 | 1 | 8 | 34 | |
| GSE46452 | C11orf42 | 160298 | 7 | 8 | 44 | |
| GSE47630 | C11orf42 | 160298 | 2 | 12 | 26 | |
| GSE54993 | C11orf42 | 160298 | 3 | 1 | 66 | |
| GSE54994 | C11orf42 | 160298 | 2 | 12 | 39 | |
| GSE60625 | C11orf42 | 160298 | 0 | 0 | 11 | |
| GSE74703 | C11orf42 | 160298 | 1 | 6 | 29 | |
| GSE74704 | C11orf42 | 160298 | 0 | 8 | 12 | |
| TCGA | C11orf42 | 160298 | 9 | 39 | 48 |
Total number of gains: 27; Total number of losses: 116; Total Number of normals: 345.
Somatic mutations of C11orf42:
Generating mutation plots.
Highly correlated genes for C11orf42:
Showing top 20/239 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C11orf42 | KRTAP2-1 | 0.715973 | 5 | 0 | 5 |
| C11orf42 | KCNG4 | 0.695384 | 3 | 0 | 3 |
| C11orf42 | ADAMTSL2 | 0.686881 | 3 | 0 | 3 |
| C11orf42 | FBRSL1 | 0.679377 | 3 | 0 | 3 |
| C11orf42 | TNNI2 | 0.676752 | 3 | 0 | 3 |
| C11orf42 | SPINT3 | 0.673712 | 3 | 0 | 3 |
| C11orf42 | OR2T27 | 0.670336 | 3 | 0 | 3 |
| C11orf42 | CELF5 | 0.668401 | 3 | 0 | 3 |
| C11orf42 | STRC | 0.667098 | 3 | 0 | 3 |
| C11orf42 | NOXA1 | 0.658112 | 3 | 0 | 3 |
| C11orf42 | C9orf153 | 0.655883 | 3 | 0 | 3 |
| C11orf42 | GLP1R | 0.655455 | 4 | 0 | 4 |
| C11orf42 | PRLH | 0.654334 | 4 | 0 | 3 |
| C11orf42 | MRGPRE | 0.651766 | 3 | 0 | 3 |
| C11orf42 | TTC23L | 0.650489 | 4 | 0 | 3 |
| C11orf42 | GYPA | 0.650247 | 3 | 0 | 3 |
| C11orf42 | GFRA4 | 0.648725 | 4 | 0 | 4 |
| C11orf42 | TUBA3D | 0.643317 | 3 | 0 | 3 |
| C11orf42 | PAX6 | 0.641082 | 4 | 0 | 3 |
| C11orf42 | STMN4 | 0.640452 | 3 | 0 | 3 |
For details and further investigation, click here
