| Full name: chromosome 15 open reading frame 54 (putative) | Alias Symbol: FLJ39531 | ||
| Type: non-coding RNA | Cytoband: 15q14 | ||
| Entrez ID: 400360 | HGNC ID: HGNC:33797 | Ensembl Gene: ENSG00000175746 | OMIM ID: |
Expression of C15orf54:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C15orf54 | 400360 | 1562367_at | -0.1874 | 0.4632 | |
| GSE26886 | C15orf54 | 400360 | 1562367_at | 0.0521 | 0.6303 | |
| GSE45670 | C15orf54 | 400360 | 1562367_at | 0.0018 | 0.9853 | |
| GSE53622 | C15orf54 | 400360 | 19371 | 0.4505 | 0.0006 | |
| GSE53624 | C15orf54 | 400360 | 19371 | 0.6197 | 0.0000 | |
| GSE63941 | C15orf54 | 400360 | 1562367_at | -0.0401 | 0.7806 | |
| GSE77861 | C15orf54 | 400360 | 1562367_at | -0.0035 | 0.9725 | |
| GSE97050 | C15orf54 | 400360 | A_33_P3390017 | 0.1509 | 0.6928 | |
| SRP133303 | C15orf54 | 400360 | RNAseq | 0.7536 | 0.0158 | |
| TCGA | C15orf54 | 400360 | RNAseq | 2.3375 | 0.0010 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by C15orf54 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C15orf54:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C15orf54 | 400360 | 4 | 5 | 21 | |
| GSE20123 | C15orf54 | 400360 | 4 | 5 | 21 | |
| GSE43470 | C15orf54 | 400360 | 4 | 6 | 33 | |
| GSE46452 | C15orf54 | 400360 | 3 | 7 | 49 | |
| GSE47630 | C15orf54 | 400360 | 8 | 11 | 21 | |
| GSE54993 | C15orf54 | 400360 | 4 | 6 | 60 | |
| GSE54994 | C15orf54 | 400360 | 5 | 8 | 40 | |
| GSE60625 | C15orf54 | 400360 | 4 | 0 | 7 | |
| GSE74703 | C15orf54 | 400360 | 4 | 5 | 27 | |
| GSE74704 | C15orf54 | 400360 | 2 | 4 | 14 | |
| TCGA | C15orf54 | 400360 | 11 | 18 | 67 |
Total number of gains: 53; Total number of losses: 75; Total Number of normals: 360.
Somatic mutations of C15orf54:
Generating mutation plots.
Highly correlated genes for C15orf54:
Showing top 20/28 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C15orf54 | OXTR | 0.658501 | 3 | 0 | 3 |
| C15orf54 | FBLN5 | 0.656562 | 3 | 0 | 3 |
| C15orf54 | LPP-AS2 | 0.652011 | 3 | 0 | 3 |
| C15orf54 | LEPROTL1 | 0.644221 | 3 | 0 | 3 |
| C15orf54 | EFEMP1 | 0.636087 | 3 | 0 | 3 |
| C15orf54 | ALG11 | 0.605295 | 3 | 0 | 3 |
| C15orf54 | ZNF445 | 0.603345 | 3 | 0 | 3 |
| C15orf54 | CCDC80 | 0.596668 | 3 | 0 | 3 |
| C15orf54 | OR1L6 | 0.588834 | 3 | 0 | 3 |
| C15orf54 | ITGA1 | 0.582326 | 3 | 0 | 3 |
| C15orf54 | SEC22C | 0.581113 | 4 | 0 | 3 |
| C15orf54 | CDKN1C | 0.580648 | 3 | 0 | 3 |
| C15orf54 | SLC26A5 | 0.574426 | 3 | 0 | 3 |
| C15orf54 | TECRL | 0.572752 | 4 | 0 | 3 |
| C15orf54 | FCGRT | 0.567629 | 3 | 0 | 3 |
| C15orf54 | LINC00454 | 0.564788 | 3 | 0 | 3 |
| C15orf54 | TTBK2 | 0.55511 | 3 | 0 | 3 |
| C15orf54 | TRPC3 | 0.550649 | 4 | 0 | 3 |
| C15orf54 | VWA5B1 | 0.547621 | 4 | 0 | 3 |
| C15orf54 | ASB3 | 0.54616 | 3 | 0 | 3 |
For details and further investigation, click here
