| Full name: chromosome 15 open reading frame 62 | Alias Symbol: LOC643338 | ||
| Type: protein-coding gene | Cytoband: 15q15.1 | ||
| Entrez ID: 643338 | HGNC ID: HGNC:34489 | Ensembl Gene: ENSG00000188277 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C15orf62:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C15orf62 | 643338 | 1569065_s_at | -1.5794 | 0.0402 | |
| GSE26886 | C15orf62 | 643338 | 1569065_s_at | -1.9192 | 0.0000 | |
| GSE45670 | C15orf62 | 643338 | 1569065_s_at | -1.2245 | 0.0015 | |
| GSE53622 | C15orf62 | 643338 | 112880 | -1.5819 | 0.0000 | |
| GSE53624 | C15orf62 | 643338 | 112880 | -1.8192 | 0.0000 | |
| GSE63941 | C15orf62 | 643338 | 1569065_s_at | 0.2167 | 0.3254 | |
| GSE77861 | C15orf62 | 643338 | 1569065_s_at | -0.9247 | 0.0165 | |
| GSE97050 | C15orf62 | 643338 | A_32_P183970 | -0.4263 | 0.4593 | |
| SRP007169 | C15orf62 | 643338 | RNAseq | -4.8709 | 0.0000 | |
| SRP008496 | C15orf62 | 643338 | RNAseq | -4.4261 | 0.0000 | |
| SRP064894 | C15orf62 | 643338 | RNAseq | -4.1733 | 0.0000 | |
| SRP133303 | C15orf62 | 643338 | RNAseq | -2.5291 | 0.0000 | |
| SRP159526 | C15orf62 | 643338 | RNAseq | -4.3773 | 0.0000 | |
| SRP193095 | C15orf62 | 643338 | RNAseq | -2.2253 | 0.0000 | |
| SRP219564 | C15orf62 | 643338 | RNAseq | -3.5541 | 0.0000 | |
| TCGA | C15orf62 | 643338 | RNAseq | -0.1042 | 0.5783 |
Upregulated datasets: 0; Downregulated datasets: 12.
Survival by C15orf62 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C15orf62:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C15orf62 | 643338 | 3 | 6 | 21 | |
| GSE20123 | C15orf62 | 643338 | 3 | 6 | 21 | |
| GSE43470 | C15orf62 | 643338 | 4 | 6 | 33 | |
| GSE46452 | C15orf62 | 643338 | 3 | 7 | 49 | |
| GSE47630 | C15orf62 | 643338 | 8 | 11 | 21 | |
| GSE54993 | C15orf62 | 643338 | 4 | 6 | 60 | |
| GSE54994 | C15orf62 | 643338 | 5 | 7 | 41 | |
| GSE60625 | C15orf62 | 643338 | 4 | 0 | 7 | |
| GSE74703 | C15orf62 | 643338 | 4 | 5 | 27 | |
| GSE74704 | C15orf62 | 643338 | 2 | 4 | 14 | |
| TCGA | C15orf62 | 643338 | 11 | 18 | 67 |
Total number of gains: 51; Total number of losses: 76; Total Number of normals: 361.
Somatic mutations of C15orf62:
Generating mutation plots.
Highly correlated genes for C15orf62:
Showing top 20/1530 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C15orf62 | ANXA9 | 0.859925 | 7 | 0 | 7 |
| C15orf62 | SLC16A6 | 0.835505 | 7 | 0 | 7 |
| C15orf62 | TMPRSS11E | 0.829467 | 6 | 0 | 6 |
| C15orf62 | PSCA | 0.827734 | 4 | 0 | 4 |
| C15orf62 | C18orf25 | 0.826307 | 7 | 0 | 7 |
| C15orf62 | VSIG10L | 0.825666 | 6 | 0 | 6 |
| C15orf62 | SPINK7 | 0.823648 | 6 | 0 | 6 |
| C15orf62 | SCNN1B | 0.821627 | 6 | 0 | 6 |
| C15orf62 | PRSS2 | 0.820185 | 4 | 0 | 4 |
| C15orf62 | TRIP10 | 0.815739 | 7 | 0 | 7 |
| C15orf62 | C5orf66-AS1 | 0.815126 | 6 | 0 | 6 |
| C15orf62 | VPS4B | 0.81468 | 7 | 0 | 7 |
| C15orf62 | RANBP9 | 0.814359 | 7 | 0 | 7 |
| C15orf62 | USP6NL | 0.814197 | 7 | 0 | 7 |
| C15orf62 | GBP6 | 0.813053 | 4 | 0 | 4 |
| C15orf62 | NAGK | 0.811409 | 7 | 0 | 7 |
| C15orf62 | CCNG2 | 0.810792 | 7 | 0 | 7 |
| C15orf62 | IL36A | 0.808712 | 7 | 0 | 6 |
| C15orf62 | ARHGAP27 | 0.808284 | 8 | 0 | 8 |
| C15orf62 | FAM214A | 0.80512 | 6 | 0 | 6 |
For details and further investigation, click here
