C2orf83

 

Full name: chromosome 2 open reading frame 83 Alias Symbol: DKFZp547H025
Type: protein-coding gene Cytoband: 2q36.3
Entrez ID: 56918 HGNC ID: HGNC:25344 Ensembl Gene: ENSG00000042304 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C2orf83:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C2orf83 56918 208265_at 0.0617 0.8251
GSE20347 C2orf83 56918 208265_at 0.0255 0.7532
GSE23400 C2orf83 56918 208265_at -0.0681 0.0482
GSE26886 C2orf83 56918 208265_at 0.1813 0.1009
GSE29001 C2orf83 56918 208265_at 0.0123 0.9424
GSE38129 C2orf83 56918 208265_at -0.0101 0.8911
GSE45670 C2orf83 56918 208265_at -0.0558 0.5744
GSE63941 C2orf83 56918 208265_at 0.1558 0.3458
GSE77861 C2orf83 56918 208265_at 0.0431 0.7029
SRP133303 C2orf83 56918 RNAseq -0.2575 0.4296
TCGA C2orf83 56918 RNAseq 1.7384 0.2537

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C2orf83 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of C2orf83:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C2orf83 56918 2 12 16
GSE20123 C2orf83 56918 2 12 16
GSE43470 C2orf83 56918 0 7 36
GSE46452 C2orf83 56918 0 5 54
GSE47630 C2orf83 56918 4 5 31
GSE54993 C2orf83 56918 1 2 67
GSE54994 C2orf83 56918 6 11 36
GSE60625 C2orf83 56918 0 3 8
GSE74703 C2orf83 56918 0 6 30
GSE74704 C2orf83 56918 2 6 12
TCGA C2orf83 56918 13 26 57

Total number of gains: 30; Total number of losses: 95; Total Number of normals: 363.  


 

Somatic mutations of C2orf83:

 

Generating mutation plots.

 

Highly correlated genes for C2orf83:

 

Showing top 20/377 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C2orf83PEX5L0.684149303
C2orf83LNP10.682896303
C2orf83PRPH0.682467303
C2orf83ZYX0.679946303
C2orf83TBR10.671318303
C2orf83KRTAP4-70.663393303
C2orf83ARPP210.658386303
C2orf83BTN1A10.65463404
C2orf83TTR0.64868303
C2orf83KCNJ100.646539303
C2orf83CA80.644842303
C2orf83MLXIPL0.632045404
C2orf83MYL10.630918403
C2orf83DENND6B0.630335303
C2orf83KCNMB20.628666403
C2orf83FAM153A0.627991505
C2orf83NUDT70.62756303
C2orf83DNAI10.627541303
C2orf83PPM1E0.624874404
C2orf83GPLD10.623807404

For details and further investigation, click here