| Full name: chromosome 5 open reading frame 47 | Alias Symbol: LOC133491 | ||
| Type: protein-coding gene | Cytoband: 5q35.2 | ||
| Entrez ID: 133491 | HGNC ID: HGNC:27026 | Ensembl Gene: ENSG00000185056 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C5orf47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C5orf47 | 133491 | 1557056_at | -0.0616 | 0.8033 | |
| GSE26886 | C5orf47 | 133491 | 1557056_at | -0.2984 | 0.0794 | |
| GSE45670 | C5orf47 | 133491 | 1557056_at | 0.0509 | 0.6752 | |
| GSE53622 | C5orf47 | 133491 | 50448 | 0.1748 | 0.1396 | |
| GSE53624 | C5orf47 | 133491 | 50448 | 0.5553 | 0.0000 | |
| GSE63941 | C5orf47 | 133491 | 1557056_at | -0.0506 | 0.8166 | |
| GSE77861 | C5orf47 | 133491 | 1557056_at | -0.2742 | 0.0236 | |
| TCGA | C5orf47 | 133491 | RNAseq | 2.5867 | 0.0131 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by C5orf47 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C5orf47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C5orf47 | 133491 | 2 | 12 | 16 | |
| GSE20123 | C5orf47 | 133491 | 2 | 12 | 16 | |
| GSE43470 | C5orf47 | 133491 | 1 | 10 | 32 | |
| GSE46452 | C5orf47 | 133491 | 0 | 27 | 32 | |
| GSE47630 | C5orf47 | 133491 | 0 | 20 | 20 | |
| GSE54993 | C5orf47 | 133491 | 9 | 2 | 59 | |
| GSE54994 | C5orf47 | 133491 | 2 | 17 | 34 | |
| GSE60625 | C5orf47 | 133491 | 1 | 0 | 10 | |
| GSE74703 | C5orf47 | 133491 | 1 | 7 | 28 | |
| GSE74704 | C5orf47 | 133491 | 1 | 6 | 13 | |
| TCGA | C5orf47 | 133491 | 7 | 35 | 54 |
Total number of gains: 26; Total number of losses: 148; Total Number of normals: 314.
Somatic mutations of C5orf47:
Generating mutation plots.
Highly correlated genes for C5orf47:
Showing top 20/42 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C5orf47 | MRGPRX2 | 0.685448 | 4 | 0 | 4 |
| C5orf47 | ZNF626 | 0.677902 | 3 | 0 | 3 |
| C5orf47 | TMEM234 | 0.651554 | 3 | 0 | 3 |
| C5orf47 | ANXA11 | 0.651222 | 3 | 0 | 3 |
| C5orf47 | PITHD1 | 0.649337 | 4 | 0 | 4 |
| C5orf47 | AKR1A1 | 0.649263 | 3 | 0 | 3 |
| C5orf47 | MUC20 | 0.639805 | 3 | 0 | 3 |
| C5orf47 | MAGI3 | 0.635026 | 3 | 0 | 3 |
| C5orf47 | ZNF844 | 0.62337 | 3 | 0 | 3 |
| C5orf47 | CRADD | 0.617803 | 3 | 0 | 3 |
| C5orf47 | MVK | 0.609833 | 4 | 0 | 3 |
| C5orf47 | AGFG2 | 0.608083 | 3 | 0 | 3 |
| C5orf47 | TACSTD2 | 0.595004 | 4 | 0 | 3 |
| C5orf47 | DHRS3 | 0.594243 | 3 | 0 | 3 |
| C5orf47 | FBXL13 | 0.593909 | 3 | 0 | 3 |
| C5orf47 | RNLS | 0.593666 | 3 | 0 | 3 |
| C5orf47 | GALR3 | 0.592355 | 4 | 0 | 3 |
| C5orf47 | ALLC | 0.592303 | 3 | 0 | 3 |
| C5orf47 | SEC14L5 | 0.58063 | 3 | 0 | 3 |
| C5orf47 | TMEM141 | 0.574142 | 3 | 0 | 3 |
For details and further investigation, click here
