CAPZA1

 

Full name: capping actin protein of muscle Z-line subunit alpha 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p13.2
Entrez ID: 829 HGNC ID: HGNC:1488 Ensembl Gene: ENSG00000116489 OMIM ID: 601580
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CAPZA1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CAPZA1 829 208374_s_at 0.0650 0.9220
GSE20347 CAPZA1 829 208374_s_at -0.4681 0.0000
GSE23400 CAPZA1 829 208374_s_at -0.0330 0.7297
GSE26886 CAPZA1 829 208374_s_at -0.3445 0.0176
GSE29001 CAPZA1 829 208374_s_at -0.1427 0.5462
GSE38129 CAPZA1 829 208374_s_at -0.2032 0.2190
GSE45670 CAPZA1 829 208374_s_at -0.0589 0.6625
GSE53622 CAPZA1 829 97600 -0.1829 0.0107
GSE53624 CAPZA1 829 97600 -0.0988 0.0464
GSE63941 CAPZA1 829 208374_s_at -0.2429 0.4732
GSE77861 CAPZA1 829 208374_s_at -0.4382 0.0533
GSE97050 CAPZA1 829 A_24_P310894 0.0205 0.9713
SRP007169 CAPZA1 829 RNAseq -1.2179 0.0023
SRP008496 CAPZA1 829 RNAseq -1.3488 0.0000
SRP064894 CAPZA1 829 RNAseq -0.2760 0.1991
SRP133303 CAPZA1 829 RNAseq -0.0180 0.9193
SRP159526 CAPZA1 829 RNAseq -0.9763 0.0005
SRP193095 CAPZA1 829 RNAseq -0.7122 0.0000
SRP219564 CAPZA1 829 RNAseq -0.4502 0.4581
TCGA CAPZA1 829 RNAseq 0.2029 0.0000

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by CAPZA1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CAPZA1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CAPZA1 829 0 10 20
GSE20123 CAPZA1 829 0 10 20
GSE43470 CAPZA1 829 0 8 35
GSE46452 CAPZA1 829 2 1 56
GSE47630 CAPZA1 829 9 5 26
GSE54993 CAPZA1 829 0 1 69
GSE54994 CAPZA1 829 7 4 42
GSE60625 CAPZA1 829 0 0 11
GSE74703 CAPZA1 829 0 7 29
GSE74704 CAPZA1 829 0 6 14
TCGA CAPZA1 829 8 27 61

Total number of gains: 26; Total number of losses: 79; Total Number of normals: 383.  


 

Somatic mutations of CAPZA1:

 

Generating mutation plots.

 

Highly correlated genes for CAPZA1:

 

Showing top 20/991 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CAPZA1ECD0.749619303
CAPZA1SLC22A230.749312303
CAPZA1C1GALT1C10.749038303
CAPZA1GLRX30.7458303
CAPZA1CBLC0.728234505
CAPZA1HLA-DPA10.71706303
CAPZA1ZDHHC50.711356403
CAPZA1KCNK60.703019404
CAPZA1TCAIM0.694263404
CAPZA1TWF10.69085210010
CAPZA1CAPN10.689989807
CAPZA1SSU720.68985404
CAPZA1MTA20.674731504
CAPZA1RTCA0.67241210010
CAPZA1STXBP20.670868504
CAPZA1ZNF2680.668577404
CAPZA1NUP1880.66782403
CAPZA1FAM83G0.667746403
CAPZA1FAM83B0.667576403
CAPZA1ACER30.666878403

For details and further investigation, click here