CASP7

 

Full name: caspase 7 Alias Symbol: MCH3|CMH-1|ICE-LAP3
Type: protein-coding gene Cytoband: 10q25.3
Entrez ID: 840 HGNC ID: HGNC:1508 Ensembl Gene: ENSG00000165806 OMIM ID: 601761
Drug and gene relationship at DGIdb

 

CASP7 involved pathways:

KEGG pathway Description View
hsa04210Apoptosis
hsa04668TNF signaling pathway
hsa04932Non-alcoholic fatty liver disease (NAFLD)
hsa05134Legionellosis

 

Expression of CASP7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CASP7 840 207181_s_at 0.7986 0.1935
GSE20347 CASP7 840 207181_s_at 0.5694 0.0020
GSE23400 CASP7 840 207181_s_at 0.5069 0.0000
GSE26886 CASP7 840 207181_s_at 0.4944 0.1539
GSE29001 CASP7 840 207181_s_at 0.8138 0.0005
GSE38129 CASP7 840 207181_s_at 0.5502 0.0001
GSE45670 CASP7 840 207181_s_at 0.9887 0.0002
GSE53622 CASP7 840 43324 0.6024 0.0000
GSE53624 CASP7 840 43324 0.7216 0.0000
GSE63941 CASP7 840 207181_s_at -0.2700 0.6120
GSE77861 CASP7 840 207181_s_at 0.4190 0.1724
GSE97050 CASP7 840 A_23_P12572 0.3424 0.2922
SRP007169 CASP7 840 RNAseq 1.1453 0.0084
SRP008496 CASP7 840 RNAseq 1.0072 0.0017
SRP064894 CASP7 840 RNAseq 0.6020 0.0036
SRP133303 CASP7 840 RNAseq 1.1019 0.0000
SRP159526 CASP7 840 RNAseq 0.2870 0.4922
SRP193095 CASP7 840 RNAseq -0.2407 0.3788
SRP219564 CASP7 840 RNAseq 0.6969 0.0749
TCGA CASP7 840 RNAseq -0.0482 0.4691

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by CASP7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CASP7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CASP7 840 1 8 21
GSE20123 CASP7 840 1 7 22
GSE43470 CASP7 840 0 9 34
GSE46452 CASP7 840 0 11 48
GSE47630 CASP7 840 2 14 24
GSE54993 CASP7 840 8 0 62
GSE54994 CASP7 840 1 10 42
GSE60625 CASP7 840 0 0 11
GSE74703 CASP7 840 0 6 30
GSE74704 CASP7 840 1 3 16
TCGA CASP7 840 4 28 64

Total number of gains: 18; Total number of losses: 96; Total Number of normals: 374.  


 

Somatic mutations of CASP7:

 

Generating mutation plots.

 

Highly correlated genes for CASP7:

 

Showing top 20/621 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CASP7TEX100.717487303
CASP7ZNF5440.703761303
CASP7RNF1490.651257303
CASP7ABHD150.64758303
CASP7IFI160.63781612012
CASP7USP410.636313303
CASP7TAP10.6356491109
CASP7PARP120.63505611010
CASP7AGPAT50.634997404
CASP7NLRC50.63136505
CASP7NMI0.62519313010
CASP7BRI3BP0.62459303
CASP7SLC1A50.623978403
CASP7GINS30.623228403
CASP7PARP140.622703808
CASP7RBM450.622413403
CASP7TRUB10.622018707
CASP7HELZ20.620895403
CASP7DDX600.6179041209
CASP7UHMK10.616701706

For details and further investigation, click here