CCDC102A

 

Full name: coiled-coil domain containing 102A Alias Symbol: MGC10992
Type: protein-coding gene Cytoband: 16q21
Entrez ID: 92922 HGNC ID: HGNC:28097 Ensembl Gene: ENSG00000135736 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of CCDC102A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC102A 92922 232051_at 0.1223 0.8184
GSE26886 CCDC102A 92922 232051_at 0.3947 0.0564
GSE45670 CCDC102A 92922 232051_at -0.2629 0.0426
GSE63941 CCDC102A 92922 232051_at -0.3708 0.2924
GSE77861 CCDC102A 92922 232051_at -0.1053 0.4018
GSE97050 CCDC102A 92922 A_23_P65983 -0.2428 0.4681
SRP007169 CCDC102A 92922 RNAseq 1.1010 0.0567
SRP008496 CCDC102A 92922 RNAseq 0.9253 0.0264
SRP064894 CCDC102A 92922 RNAseq 0.5730 0.0623
SRP133303 CCDC102A 92922 RNAseq 0.4766 0.0356
SRP159526 CCDC102A 92922 RNAseq 0.4506 0.2186
SRP193095 CCDC102A 92922 RNAseq 0.7152 0.0000
SRP219564 CCDC102A 92922 RNAseq -0.0742 0.9062
TCGA CCDC102A 92922 RNAseq 0.2624 0.0172

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCDC102A expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC102A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC102A 92922 6 0 24
GSE20123 CCDC102A 92922 6 1 23
GSE43470 CCDC102A 92922 3 5 35
GSE46452 CCDC102A 92922 38 1 20
GSE47630 CCDC102A 92922 10 8 22
GSE54993 CCDC102A 92922 2 4 64
GSE54994 CCDC102A 92922 7 10 36
GSE60625 CCDC102A 92922 4 0 7
GSE74703 CCDC102A 92922 3 3 30
GSE74704 CCDC102A 92922 5 0 15
TCGA CCDC102A 92922 26 12 58

Total number of gains: 110; Total number of losses: 44; Total Number of normals: 334.  


 

Somatic mutations of CCDC102A:

 

Generating mutation plots.

 

Highly correlated genes for CCDC102A:

 

Showing top 20/21 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC102APRSS500.652972303
CCDC102ATTYH20.64519303
CCDC102AACTR1B0.629802303
CCDC102ADTNB0.621576303
CCDC102ABCL20.620062303
CCDC102AWTIP0.599754403
CCDC102AFBLN20.599604403
CCDC102ABICD10.589835303
CCDC102ANEUROG20.587893303
CCDC102ATEF0.581224303
CCDC102ASUSD50.564847404
CCDC102AGRIA20.560714403
CCDC102ARAB290.551738303
CCDC102APAMR10.547412403
CCDC102ASOX120.531303303
CCDC102AOBSL10.518889503
CCDC102ASHH0.515183503
CCDC102ASHC30.513222403
CCDC102ALOXL30.508009403
CCDC102AFBXO310.501379503

For details and further investigation, click here