GRIA2

 

Full name: glutamate ionotropic receptor AMPA type subunit 2 Alias Symbol: GluA2|GLURB
Type: protein-coding gene Cytoband: 4q32.1
Entrez ID: 2891 HGNC ID: HGNC:4572 Ensembl Gene: ENSG00000120251 OMIM ID: 138247
Drug and gene relationship at DGIdb

 

GRIA2 involved pathways:

KEGG pathway Description View
hsa04024cAMP signaling pathway
hsa04713Circadian entrainment
hsa04720Long-term potentiation
hsa04723Retrograde endocannabinoid signaling
hsa04724Glutamatergic synapse
hsa04728Dopaminergic synapse
hsa04730Long-term depression
hsa05014Amyotrophic lateral sclerosis (ALS)
hsa05030Cocaine addiction
hsa05031Amphetamine addiction

 

Expression of GRIA2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GRIA2 2891 205358_at -0.1596 0.6076
GSE20347 GRIA2 2891 205358_at 0.0786 0.2364
GSE23400 GRIA2 2891 205358_at -0.3002 0.0026
GSE26886 GRIA2 2891 205358_at 0.2722 0.1111
GSE29001 GRIA2 2891 205358_at 0.3536 0.5044
GSE38129 GRIA2 2891 205358_at -0.4692 0.0473
GSE45670 GRIA2 2891 241172_at 0.0413 0.5623
GSE53622 GRIA2 2891 75810 -0.0990 0.6061
GSE53624 GRIA2 2891 75810 -0.2135 0.1526
GSE63941 GRIA2 2891 241172_at 0.0097 0.9500
GSE77861 GRIA2 2891 205358_at -0.0538 0.6128
GSE97050 GRIA2 2891 A_33_P3230161 -0.4826 0.3150
SRP133303 GRIA2 2891 RNAseq -1.9090 0.0002
TCGA GRIA2 2891 RNAseq -2.5379 0.0011

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by GRIA2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GRIA2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GRIA2 2891 0 16 14
GSE20123 GRIA2 2891 0 15 15
GSE43470 GRIA2 2891 0 14 29
GSE46452 GRIA2 2891 1 36 22
GSE47630 GRIA2 2891 0 23 17
GSE54993 GRIA2 2891 10 0 60
GSE54994 GRIA2 2891 1 12 40
GSE60625 GRIA2 2891 0 1 10
GSE74703 GRIA2 2891 0 12 24
GSE74704 GRIA2 2891 0 8 12
TCGA GRIA2 2891 11 35 50

Total number of gains: 23; Total number of losses: 172; Total Number of normals: 293.  


 

Somatic mutations of GRIA2:

 

Generating mutation plots.

 

Highly correlated genes for GRIA2:

 

Showing top 20/134 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GRIA2MYBPC10.805596303
GRIA2ATP1B20.67625303
GRIA2FXYD10.672553404
GRIA2TUBB2B0.666601303
GRIA2MYCN0.664153303
GRIA2CRY20.658073403
GRIA2LINC004720.651921403
GRIA2DGKB0.650529403
GRIA2PHKA20.644749303
GRIA2ZNF4490.640015303
GRIA2BEND50.638261504
GRIA2LPAR40.636514504
GRIA2ARHGAP60.63178403
GRIA2EYA10.631423303
GRIA2ATP7B0.628212403
GRIA2SBSPON0.627827303
GRIA2MLPH0.627602404
GRIA2KCNN30.626617403
GRIA2ZFP20.626555303
GRIA2PPP1R1A0.624188403

For details and further investigation, click here